Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2659 |
Symbol | |
ID | 6878658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2638162 |
End bp | 2638968 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642790516 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_002221060 |
Protein GI | 198284739 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAT TGGCGGAAAA CACCTTTATC GGCCATTTGC TGGAGTTGCG CCGCCGCGTG TTATTTGCAG TGATCGCTAT TTTTGTTGGC TTTCTGATCT CCTATCCTTT CTCCAAAACG ATTTATAACA TTCTCGCGGC CCCGCTTATT GATATATTAC CAAAGGGCAG TCATTTAATT TATACCAGTT TACCCGAAGT ATTTTTGACC TACGTGCAGC TTTCTTTGTT GTCCGGATTT ATTCTGGCGC TACCTGTCGT GCTCTATCAA TTCTGGGCCT TCATAGCGCC CGGCCTCTAT GAGCATGAGC GCAAGGCCTT TTTTCCGCTG ATCTTTGCCT CCATTTTTCT GTTCATCGGC GGCATGCTCT TTGCGTACTT TATCGTATTT CCCAATGCCT TCCGGTTTTT CGTGAGCTTT TCTGGCGGTG ATATCACCGC CATGCCCAAA GTGGATAGTT ACCTCTCGCT CATCGTCAAG TTCTCCCTGG CCTTCGGTCT GGCCTTCCAG ATCCCCATTC TCATTATTGT ACTGGTACGC GTCGGGGTGC TGCAGGTGGC CACACTGCAG CACGGTCGCC GCTATGCCTT CCTGATTTGC GCCATCGCCT CTGCATTGCT CAGTCCTCCC GACGTGTTAT CCATGGTCAT GCTCCTCATC CCCATGTATA TGCTTTTTGA ACTCGGATTA TTTTTCGCCG CAAGATTGCC CGGGCCTCGG CCTGCGGAAG AAGACACCGG GGATAATGAT ATTGCTCCGT CATCCCACAG CATTGACGAG AAGGATAGTG ATACATCACG AAGCTGA
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Protein sequence | MDKLAENTFI GHLLELRRRV LFAVIAIFVG FLISYPFSKT IYNILAAPLI DILPKGSHLI YTSLPEVFLT YVQLSLLSGF ILALPVVLYQ FWAFIAPGLY EHERKAFFPL IFASIFLFIG GMLFAYFIVF PNAFRFFVSF SGGDITAMPK VDSYLSLIVK FSLAFGLAFQ IPILIIVLVR VGVLQVATLQ HGRRYAFLIC AIASALLSPP DVLSMVMLLI PMYMLFELGL FFAARLPGPR PAEEDTGDND IAPSSHSIDE KDSDTSRS
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