Gene Lferr_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2618 
Symbol 
ID6878617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2603429 
End bp2604754 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content60% 
IMG OID642790475 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_002221019 
Protein GI198284698 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAGG GGGCCAGGGG GTTGACGGCA CAGATCAAGG ATCGGCTGAT CCAGAAAACT 
TTGGAGAGGC GCCTGACGCA GTTGGAGCAA ACGCCGGTAC GTACTGTCGT GGAGAGCGGT
ATTCCGGAAC GGTTTTACCG CTGGGATCTG CACCCGGGCT ACCAGCAGGT GCGCCTGCTG
CAGGAAGGTG CTGCGCGTTT CGGTGTAGAA AACCCGTTTT TCAAGGTGCA TGAGGGCACC
GCTTCGGCCC ACAGCCGGAT AGTGGAAAAA ACCGTGGTCA ATTACGCCAG TTACAATTAC
CTGGGTCTGT CTGGGCATCC GCTGGTCAAC GCCGCGGCTA AGGAGGCCAT CGACCGTTAT
GGAACTTCCG TGTCCGCGAG CCGCATTGTC TCTGGAGAGC GGCCCTTGCA CGCGCAGTTG
GAGCGGGCCA TTGCCCAGGC CTATGGCGTA GACGACGCCA TTGTGATGGT GAGCGGGCAT
GCCACCAATG TCACCAGCAT CGGTTATCTT TTTGGGCCGA ACGATCTCGT TCTTCATGAT
GAATACGCCC ATAACAGCAT TATCCAGGGC ATCAGCCTGG CGGGTGCCAA GCGCCTGTGC
TTTCCCCATA ACGATCTGGA GGCCTTGGAG CAGATCCTGA CGCAACAGCG TCGTCAGGCG
GAGCGCGTCC TGGTCGTTGT CGAGGGTATC TACAGCATGG ATGGGGATTA CCCCGACCTG
CCCCGGTTTA TCGAGATCAA GCATCGGCAT CGGGCCTTGC TGATGGTCGA CGAGGCCCAT
TCCTTCGGCG TGTTGGGCCG CCACGGGATG GGGATCCGTG AGCACTTTGA CCTGGACCCG
AAGGACGTCG ATATCTGGAT GGGCACCCTC AGCAAGGCGC TGGCGGCCTG TGGCGGCTAT
ATTGCGGGGG CATCGGCCCT CGTCGAAAAC CTGCGTTATC TGGCCCCCGG ATTTTTGTAT
AGCGTCGGTA TGGCGCCACC CGTGGCGGCG GCCGCCTTGT CGGCCTTGCA GGTGCTTCAG
GCGGAACCAC AAAGGGTGAG CACCTTGCAG CAGCGAAGCC GGTATTTTTT GGAGAAGGCA
CGCGGCGTTG GCCTGCAAAC AGGCGCCAGC ACCGGCAACG CCATTGTGCC GGTCATAACC
GGCAGTTCCC TGCGCGCGGT GCGCCTTTCC AATTGGCTGC TGGAGCGAGG GATTCATGTG
CAGCCCATCC TGTATCCAGC CGTCCCGGAG CGGCAGGCAC GCCTGCGCTT TTTTCTGAGT
TCCGAGCATA CGCTGGAAGA TATTGATGAG ACGATGACGA TTCTGGCCGA AGACTTGCGT
GCCTGA
 
Protein sequence
MGQGARGLTA QIKDRLIQKT LERRLTQLEQ TPVRTVVESG IPERFYRWDL HPGYQQVRLL 
QEGAARFGVE NPFFKVHEGT ASAHSRIVEK TVVNYASYNY LGLSGHPLVN AAAKEAIDRY
GTSVSASRIV SGERPLHAQL ERAIAQAYGV DDAIVMVSGH ATNVTSIGYL FGPNDLVLHD
EYAHNSIIQG ISLAGAKRLC FPHNDLEALE QILTQQRRQA ERVLVVVEGI YSMDGDYPDL
PRFIEIKHRH RALLMVDEAH SFGVLGRHGM GIREHFDLDP KDVDIWMGTL SKALAACGGY
IAGASALVEN LRYLAPGFLY SVGMAPPVAA AALSALQVLQ AEPQRVSTLQ QRSRYFLEKA
RGVGLQTGAS TGNAIVPVIT GSSLRAVRLS NWLLERGIHV QPILYPAVPE RQARLRFFLS
SEHTLEDIDE TMTILAEDLR A