| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2583 |
|---|
| Symbol | |
|---|
| ID | 6878582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2557607 |
|---|
| End bp | 2559256 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642790440 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002220984 |
|---|
| Protein GI | 198284663 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATA CTTTCTATTC CGGTCGACTC ATATTTCACC ATTTGGAAAA AACTGCTGGC
CAAGCAGTTA ATGACTGGAT GGGCAGGACT TTAGGGGTTG GCACAGTAAC GCCCAATTTG
ATTGGTGCAC ATAGGGATTT GATTCAGCGT TATGGTGGAC ATTATCCTGT CATTAGTGCC
CATATTTGGT TTGACGGTAC CGGGTTGGAT CCGCGTTATC AGTATGTTAC AGTTTTGCAC
GACCCCGTTG ATCGCTTCAT TTCCTGGCTT TATTTTATCG ATAAAGATGT GGAGCTAACG
GAGGATACTA GGGAACTAAA GGTGGGTGCA CAATTGTTCC TGCGCTCCGA AGGAGAAGAG
ACAAATCAGA CTTTTATGCG AAGTGCGTCA AATCCCTATG TCAACAACTT CAGTAGTGTA
GTTATGCGAT GCAATGCGTC ATGGCAACAG AAAATGGTGG CTGCACTGTC AGTGCTCACT
GACTATGATT TAGTGGGTTT CCAGGCAGAC TTGCCGCAAT TTATTGAGCA ACTTGCCAAA
TTGTTGCATG TTATAAACTA TGTATCCCTA CGCCCCGTTA ATGTCACTAG TTCTCGGCCA
CAGCGGGACG GTATTTCTGA GAAGATGCTC CATGCTATAC GCAAGCTAAC TGAGTGGGAT
TTGGAGCTTT ATTCTGAGAT TCAACGAATG GCCAACCGGC AAGCGCCAAC AATTGGTGTC
TCTTGCAATA TTCAGCCGTT CAATCGGGAG TTTGGTGATT GGGGGTTCAA GGCAAGAAAG
TCCTCTAATG TGTATTGGCT TGGATCCTAC CTGACGCACT ACTTAGCTAA GGATTTGAGC
ACGCGGAATG GTTCTGTGGC GGGGCGGGCT CTTGTTAGTA ACGGAGCTAA AGGTTATTTA
TGCCACGGCC CGTACCTGGA CCTGGACCCA GGACATTATT GTGCGGTAGC AAACGGAGTT
TGGATTACGC GAGGCGTTAC TTGTAATGCC GACGTTTGCA GTGGTAAAGG CGCTGTCTTG
CATGCCGAAG AAACGCTGGT TGACTTGGGG GCTAAAGGCA CCGAATGGTC TCTACCCGTA
GACTTTGCCT TGGATGAAGA AACAACGAGT GTAGAATTTC GCCTAATGGT TCCCGATGAA
CACCAAGTTC AATTGAATAC GGTCACCATT GTGAATGAGA AAATGGTTAT GACGATCTTG
GGCTTGGAAC CTGACTCCCA TGCGGCGAAT CGCGGTGTAG AGAAACAGAA TTCAGGGAGT
ACCCTTATTT TTCCGGTGCA AATGTCTTCG AAAATCGGGT TGCGTGTTGG TACAACGTTG
CAGACAACTG GTCAGGAGGG ATTTTTGTGC TATGGGCCTT ACATGACCCT AAGTAGAGGT
ATATACAGAG TTAACCTGAT GGGTAGTATC GGACCCCAGG GTTTGGCTGG GGCTTATGCC
GATATTGTTT GTGACGCAGG GAAAAAAGGC ATACACAACG AACCGTTGGC AATCACTCCA
TTCAATGAAT ACGTCGATAG CACTGTTGGG AAGCCGTGGA TGTTTTTCTT GGAACAGGAT
GTGAGTGACT TGGAGATTCG GCTCTGGGTG AGCAATCAGA CGGAAATCAA CCTATGTGGC
ATCGTGCTCC AACAAATTGA AGAAACATAG
|
|---|
| Protein sequence | MVNTFYSGRL IFHHLEKTAG QAVNDWMGRT LGVGTVTPNL IGAHRDLIQR YGGHYPVISA
HIWFDGTGLD PRYQYVTVLH DPVDRFISWL YFIDKDVELT EDTRELKVGA QLFLRSEGEE
TNQTFMRSAS NPYVNNFSSV VMRCNASWQQ KMVAALSVLT DYDLVGFQAD LPQFIEQLAK
LLHVINYVSL RPVNVTSSRP QRDGISEKML HAIRKLTEWD LELYSEIQRM ANRQAPTIGV
SCNIQPFNRE FGDWGFKARK SSNVYWLGSY LTHYLAKDLS TRNGSVAGRA LVSNGAKGYL
CHGPYLDLDP GHYCAVANGV WITRGVTCNA DVCSGKGAVL HAEETLVDLG AKGTEWSLPV
DFALDEETTS VEFRLMVPDE HQVQLNTVTI VNEKMVMTIL GLEPDSHAAN RGVEKQNSGS
TLIFPVQMSS KIGLRVGTTL QTTGQEGFLC YGPYMTLSRG IYRVNLMGSI GPQGLAGAYA
DIVCDAGKKG IHNEPLAITP FNEYVDSTVG KPWMFFLEQD VSDLEIRLWV SNQTEINLCG
IVLQQIEET
|
|---|
| |