Gene Lferr_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2544 
Symbol 
ID6878543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2510602 
End bp2511861 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content59% 
IMG OID642790401 
ProductCyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_002220945 
Protein GI198284624 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGATC TACGCACCAA CTTTTTGGAC CACGTCAAAA AGGGTCTCAA CGGAAAACCG 
CTGTTTCTGC GCATCATCTT CTGGGATGGC CATGAATACG CCTTCAACCA GGACATCCGC
GTCACCATGC ACATCAGCTC CGCCAAACTC ATCTCGCGCA TGCTCATGGG CAGTGCCCTG
GATGTGCTTG GCGAAGGGTA CGTAGAGGGC ACCATCGGCA TCGATGGTCG CTATCAGGAT
ATTCTCGCGG TGGCGGAAGG GCTGAGTGAC GCATTCCCCG CCAAAAAACC CAGGAGCGGC
ATTTTCCGCA AATATCACGC CGCCCACAGC AAATCCCGGG ATGCCGACGC GATTCACTAC
CACTACGATG TTTCCAACGA CTTCTACAAG CTCTGGCTGG ACCGCAACAT GGTCTACTCC
TGCGGCTACT TCAAAACCGG CGCGGAAGAT ATCGACACCG CCCAAGAGCA GAAGCTGGAC
CATATCTGCC GCAAACTCCA TCTGCAGCCG GGTGAAAAGC TTCTGGATAT CGGCTGCGGC
TGGGGTGGTC TGCTGAGCTG GGCCGCAACA CATTACGGGA TTCAGGGCGT GGGGGTCACC
CTCAGCGAGC AGCAGTTTGC CTACGCCAAG GAACGTATGG AACGCGAGGG TCTGGCGGAT
CGGGTGGAAA TCCGCCTGCA GGATTACCGC GACATTCCAG AACGGGATTA TTTCGATAAG
GTCTCTTCGG TAGGGATGTT CGAGCATGTC GGCCGCGCCA AGCTCGGAGA ATATTTTGGC
GTCATCAACC GGGTGCTCAG GGAAGGTGGC TGGGTGATGA ATCACGGCAT CACCGCCAGC
CAGCAGGATG ACGAAGACGG GCACCATTCC GGCAGCGATT TCATGGACAA GTACGTCTTC
CCAGACGGCG AAATCCCGCA TCTGTGGCGC CTGGTGCTGG AAATGGCGGG GCAGGATCTG
GAAGTCCTGG ACGTGGAAAA TCTCCGCCCC CACTACGCCC AGACGCTCAT CCACTGGGTA
CAACGTCTGG AAGCACACAA GGACAAAGCC ATCGCCATGG TGGGGGACAA GCGCTATCGC
ATCTGGACCA TCTACATGGC GGGCTGCGCC TATGCCTTCT GGCGCAACTG GTCGGCCCTG
CACCAGGTGC TGGCCGTCAA ACAGGGCGGT GCCGAGCTGA CGCCGCGGCC CTGGGAGCGG
CATTACCAGT ATCAGGAGGA CAGTTTCCGC CTGGCCGCGC CAGATTGGGG GGATTTGTAA
 
Protein sequence
MKDLRTNFLD HVKKGLNGKP LFLRIIFWDG HEYAFNQDIR VTMHISSAKL ISRMLMGSAL 
DVLGEGYVEG TIGIDGRYQD ILAVAEGLSD AFPAKKPRSG IFRKYHAAHS KSRDADAIHY
HYDVSNDFYK LWLDRNMVYS CGYFKTGAED IDTAQEQKLD HICRKLHLQP GEKLLDIGCG
WGGLLSWAAT HYGIQGVGVT LSEQQFAYAK ERMEREGLAD RVEIRLQDYR DIPERDYFDK
VSSVGMFEHV GRAKLGEYFG VINRVLREGG WVMNHGITAS QQDDEDGHHS GSDFMDKYVF
PDGEIPHLWR LVLEMAGQDL EVLDVENLRP HYAQTLIHWV QRLEAHKDKA IAMVGDKRYR
IWTIYMAGCA YAFWRNWSAL HQVLAVKQGG AELTPRPWER HYQYQEDSFR LAAPDWGDL