| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2540 |
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| Symbol | |
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| ID | 6878539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2507018 |
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| End bp | 2508709 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642790397 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_002220941 |
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| Protein GI | 198284620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCC GGAGTAGTGC CGTCGGACGA GTCTTCGGAC TCAAGGCATC CGCGGTTTTT
TTGCTGGCGC TGCTGTTTTT CGGCTGGGAC GTGGGCAATA CCAGTCTGTG GAACATCGAT
GAGCCCATCT ATGCGCAATC CCTGAAAGAA CAGATCGCCC AGCACAATCT GGTGGTACCG
ACCTTCAACG CACGGCTGAT GCCTGACAAG CCGGCGCTGA ACTACTGGCT GATGTGGACC
GGCGTCAAAA TGCTGGGAAT GAACTCCTGG GGTTTACGAA TGGGTTCCGC CGTTGCCGGC
GCCCTGCTGG TTCTGTATCT GATCATCGGA TTGCGGCGTC TGTATGGTGA AAACATCGCA
CTGATCAGCG GGCTGATGAC CGCCACGGCA CTGCACAGCA CCGTGATTTT CCGCAGCGCC
ACCCCTGATC CGCTGCTGAT CCTGACGGTG ACGATCGCCC TGCTGAGCTA CCTGCGCGGT
TATCTGTTCC CGGACATACG CAGCCGCGAA ATCCTCATCG CCTATGCCGC CATGGCCCTC
GCCACGCTGG ACAAAGGCCC CATTGGATTT CTCTTGCCCG GCCTGATCAT CGTCCTGTTT
TTGCTGCTGC GCCGGGAACT GTCCTTTCTC TGGCGGGAAG GCCGACTGAC CTGGGGAGTA
CCGATCTTTC TGATCATCGC CCTGCCCTGG TATCTTGCCG TCGGCGTCGA AACCCACTGG
GCCTGGGATC GCGCTTTCGT CTTCAAGCAG AACATCGGCC GCTTCAGTGA CAGCATGCAG
GGGCACCGTG GGCCTTGGGT CTATTATCTC ATCAGCACCT TCCTCGGGAT GCTGCCCTGG
TCGATTTTTT TACCCCAGGT TTTCCGTGAT GTATGGCTTT CCCGGCGGCA ATTTTTGCGC
AGCCATCCGA AGACATTGTT CCTGCTGGTC TGGGCGGCAG CGTGGATCGG CTTTTTCACC
CTCTCCGCTA CCAAACTCCC CAATTACGTC TGGGAAGCCT ATCCGCCGCT CTTCATTCTG
CTGGCCGCCT ATTTCGAGAA AATCCGGGCG GGTACCACTC GTCCTGCGCG CCGGGGTTTG
ATCCTGTCGG CCGGAGTGCT GTTCCTGATC GGACTGGCCA TGAGCCTTTT TGCGGGCTTG
GTCCTACCGC TACGCGAGCC GCACCTGCCG GACATGGTGG AGATCGGCCT GCCTTATCTG
CTGGCTGCGG CCGGCGCCGG CGCCCTGCTC TGGCACCGGC GCTGGGTGCC GGCATGGGCG
ACTTTGGGCG TCGGCGGCAT GGCGCTGACT GCCTTGCTGG TCTTTGTCAT CACCCCGTCC
TTGAATGGGG TGAAGCCCTC CCGGGAGATG GGGCAACGTA TTGCCGCCCT GCAAGGCCCG
CAACCTTATC GGCTGGCGTC CTGGCAATGG TTTCAGCCGA GCTTTCTGTT TTATGCCGGG
CGCGGCAACA TGCCCATCCG TCATTTGCAG ACCCTGACGG AATTACCGGC GGTGCTCGGT
CCGGAGCCGC TCTATCTCGT CTGCCCGGAA CACGCCGTCG CCGCAGTTCG CGCCGCCGTG
CCCGCGGCAT ACCGGCAGCA GACCGTCCTG CTGCGCTACG AGATCTATAA CCACGAAAAT
ATCGCCCTGT TGCGGATCAG CCCGCGCACG AAAGGCCTTG ACCATGCCAT TGCGCCTTAC
TACCATGAAT AA
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| Protein sequence | MFSRSSAVGR VFGLKASAVF LLALLFFGWD VGNTSLWNID EPIYAQSLKE QIAQHNLVVP
TFNARLMPDK PALNYWLMWT GVKMLGMNSW GLRMGSAVAG ALLVLYLIIG LRRLYGENIA
LISGLMTATA LHSTVIFRSA TPDPLLILTV TIALLSYLRG YLFPDIRSRE ILIAYAAMAL
ATLDKGPIGF LLPGLIIVLF LLLRRELSFL WREGRLTWGV PIFLIIALPW YLAVGVETHW
AWDRAFVFKQ NIGRFSDSMQ GHRGPWVYYL ISTFLGMLPW SIFLPQVFRD VWLSRRQFLR
SHPKTLFLLV WAAAWIGFFT LSATKLPNYV WEAYPPLFIL LAAYFEKIRA GTTRPARRGL
ILSAGVLFLI GLAMSLFAGL VLPLREPHLP DMVEIGLPYL LAAAGAGALL WHRRWVPAWA
TLGVGGMALT ALLVFVITPS LNGVKPSREM GQRIAALQGP QPYRLASWQW FQPSFLFYAG
RGNMPIRHLQ TLTELPAVLG PEPLYLVCPE HAVAAVRAAV PAAYRQQTVL LRYEIYNHEN
IALLRISPRT KGLDHAIAPY YHE
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