Gene Lferr_2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2528 
Symbol 
ID6878527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2494155 
End bp2495630 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content58% 
IMG OID642790385 
ProductSpoVR family protein 
Protein accessionYP_002220929 
Protein GI198284608 
COG category[S] Function unknown 
COG ID[COG2719] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGGT TCCTCTTTAC CGACAACGAC TGGACCTTCG CGCGGATCGA TGCGGTCACC 
GAAGAAATTG CGGCCATCGC CGCAGATGAA CTTCAGCTCG ACACCTATCC CAACCAGTTG
GAGATCATCA GCGCCGAGCA GATGCTCGAT GCCTATGCCT CCATCGGGCT TCCGGTTTAT
TACGCCCACT GGTCTTTCGG CAAGCAACGT GCCATCGAGT CCGGGCAGTA CCGTCGCGGC
GAAATGGGTC TGGCGTATGA ACTGGTGATC AACAGCAATC CCTGCATCAG CTACCTCATG
GAAGAAAACA CCATGACCAT GCAGACTCTG GTGATCGCCC ATGCGGCTTA TGGGCATAAC
GCCTTTTTCA AGAACAACGT CTTTTTCCGG CAATGGACGG ATGCGGAGGG CATTCTGGAT
TATCTGGCGT TCGCCCAGCG CTACATCGCC CGCTGCGAGG AACGCTATGG GATCGAGGCG
GTAACCGACA TATTGGATGC AGCCCATGCC ATCAGCCGCA ATGGCGTGGA TCGCGCCCGC
CGCCCGCGCC AGCTCTCGGC CCGCGAGGAA GAGCAACGCC GCGAAGAACG TGAACGCTAC
CTGCAGCAGC AGCTCTTGGA AATATGGCGC ACCCTGCCTC CGCATGACAC CAGCCAGCCC
GTTGATTCCA ACGTATTCCC GCCAGCCCCC CAGGAAAACC TGCTCTATTT CATCGAAAAA
AACGCCCCAC ACCTGGAGGG CTGGAAGCGG GAAATACTGC GTATCGTGCG CAAGATCGCC
CAGTATCTCT ATCCCCAGGG ACAGACCAAG ATCATGAACG AGGGCTTCGC GTGCTTCGTG
CATTACCATA TCCTGCACAG CCTGCATGCC CGGGGGCTGA TTACCGACGG CACCCTGCTG
GAGTTTTACG CCAGCCACAC CGCCGTCACC TTCCAGCCGG ACTTCGATGA TCCGCGCTAC
AGCGGAATCA ACCCCTATGC CCTGGGTTTT GCCGTGTTCC AGGACATCAA GCGGATTTGT
CTCGCGCCCA CGGACGAAGA CCGCCGCTGG TTTTCCTTTG CCGGAGACCC CGACTGGCGC
AAGCAGATTC ACTTCGCCAT GCGCGAATTC CGTGACGAAA GCTTCGTCCT GCAATACCTC
TCGCCCAAGG TCATGCGCAA CCTGCACCTC TTTGCCCTGA GCAACGACCC AGACGCTACG
ACATACCGGG TCAGCGCCAT CCATGATGAC TCGGGCTACC AGTATCTGCG CCAGGCTTTT
GCCCGACAAA TCGCGGAAAG CGCCCGCCCG CCGGACATTC AGATCGTGTC CGTGGATCGC
TGGGGGGACC GTCATCTGCG TCTACGGCAG ATGGATTCTC AGCCCCTCGA TCAGGATGAA
GCCCAAAAGA CCCTCCATTT GATTCACACC CTCTGGGGGT ATGATGTTCA TCTGGACATG
GAAGAGCTTT CCCTGAGCGA ATCCGGCGCA CCCTGA
 
Protein sequence
MSRFLFTDND WTFARIDAVT EEIAAIAADE LQLDTYPNQL EIISAEQMLD AYASIGLPVY 
YAHWSFGKQR AIESGQYRRG EMGLAYELVI NSNPCISYLM EENTMTMQTL VIAHAAYGHN
AFFKNNVFFR QWTDAEGILD YLAFAQRYIA RCEERYGIEA VTDILDAAHA ISRNGVDRAR
RPRQLSAREE EQRREERERY LQQQLLEIWR TLPPHDTSQP VDSNVFPPAP QENLLYFIEK
NAPHLEGWKR EILRIVRKIA QYLYPQGQTK IMNEGFACFV HYHILHSLHA RGLITDGTLL
EFYASHTAVT FQPDFDDPRY SGINPYALGF AVFQDIKRIC LAPTDEDRRW FSFAGDPDWR
KQIHFAMREF RDESFVLQYL SPKVMRNLHL FALSNDPDAT TYRVSAIHDD SGYQYLRQAF
ARQIAESARP PDIQIVSVDR WGDRHLRLRQ MDSQPLDQDE AQKTLHLIHT LWGYDVHLDM
EELSLSESGA P