Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2482 |
Symbol | |
ID | 6878480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2446864 |
End bp | 2447901 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642790339 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002220884 |
Protein GI | 198284563 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTT CCCCCAAAAA ACGTGCTCTG GCACTGGTAG TAGTGCTTAT CGTTGCTGGT GCGGTCGCCT ATTATTTTCT GAGCCGCCAT CACGCCCCAG AAAAAACCGT CACCATCTAC GGCAATATCG ACATCCGCCA GGTACAGGCG GCCTTTGACG ACAACGGCCG GCTTCTCGAT CTCCGGGTAC AGGAGGGCGA CCGGGTAAAA AAGGGACAAT TGCTGGCGGA TCTGGACCCC GTACGGTTTC AGGACGCCGT AGATAAAGAT GCCGCAGGTA TGGCCGCGCA AGAGCAGGTG CTGGCGCGCC TGCTGGCGGG TTCCCGTCCG GAAGAAATCG CCGAGGCCCG GGCCGAAGCC GCTGCCGCTC AGGCGACCCT GAGCAATGCC GAGATCACCT GGCAACGCCA GCAGGCCCTT GCCGCACGGC AATATGTGCC CAAACAGAGT CTCGACAACG CCGCCGCCGC CCTGAAAACG GCTCGCGCCA ATCTGGACCG CGCCCAGCAG GCACTGACCC TGGCCATCAA GGGGCCGCGC AAAGAAGATA TTGCGGCGGC GCGGCAGCAG TTACAAGCCG ATAAGGCAGG TCTGTCTCTG GCGCGCCGCG AACTCACGGA CACCCGTCTT TATGCGCCAG AAGACGGTGT CGTTCAGGAC CGTATTCTGG AGCCGGGCGA CATGGTTTCC CCGCAGACTC CAGTATTCAC TTTGGCATTG GACAATCCGG TCTGGGTGCG CGCCTATCTG CCGGAAAAGG CATTGGGGCA GGTGCGGCTG GGCATGAAGG CGACGATTAG CAGTGATTCC TTCCCGGGCA AATCTTTCCC GGGCTGGGTG GGTTTCATTT CACCCACTGC GGAATTCACG CCCAAGACCG TGCAAACCAC GGAGTTGCGT ACGGAACTGG TGTACCGGGT GCGGGTCTAT GCCTGCAATC CGCAGCATCG CCTGCGCCTG GGTATGCCCG TCACCGTTCA TATTCCGCTG ACAGACAATC AGCCGCAAAA GCTTTCTGCG CATCCCTGCG GAAACTGA
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Protein sequence | MAISPKKRAL ALVVVLIVAG AVAYYFLSRH HAPEKTVTIY GNIDIRQVQA AFDDNGRLLD LRVQEGDRVK KGQLLADLDP VRFQDAVDKD AAGMAAQEQV LARLLAGSRP EEIAEARAEA AAAQATLSNA EITWQRQQAL AARQYVPKQS LDNAAAALKT ARANLDRAQQ ALTLAIKGPR KEDIAAARQQ LQADKAGLSL ARRELTDTRL YAPEDGVVQD RILEPGDMVS PQTPVFTLAL DNPVWVRAYL PEKALGQVRL GMKATISSDS FPGKSFPGWV GFISPTAEFT PKTVQTTELR TELVYRVRVY ACNPQHRLRL GMPVTVHIPL TDNQPQKLSA HPCGN
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