Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2477 |
Symbol | |
ID | 6878475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2442154 |
End bp | 2443530 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642790334 |
Product | signal recognition particle protein |
Protein accession | YP_002220879 |
Protein GI | 198284558 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGACA ATCTGACCCA GAAACTGACC CAGACTTTCA AGAATCTGCG CGGCCAGGGA CGGCTGAGCG AGGACAACAT CCGTGACGCC CTGCGCGACG TGCGCCTGGC GCTGCTGGAG GCGGATGTTG CCCTGCCGGT GGTCAAGGAC TTTATCAACA ACGTGCGCGA ATCGGCCATG GGCGAAGCCG TGGTCAAAAG CCTCACGCCG GGGCAAGTCT TCGTCAAGAT CGTCCACGAC GAACTGGTAC AGTTGATGGG CGCGCATAAC GACAGTCTCG ATCTCAGCGC CCGTCCCCCG GCGGTGATTC TCCTCGCGGG TTTGCAGGGT TCGGGTAAGA CTACCACTAG TGCCAAGCTC GCCCTGTGGC TCAAGGACAA GGAAAAGAAG CGCGTGCTGA TGGTCAGTAC CGACGTCTAT CGTCCGGCCG CCATGGAACA GTTGGTGCAT CTGGGTAAGG ACATCGAGGT GGATGTATTT CCCTCCAGCC CCGGCCAGCA GCCGGTGCGT ATCGCCCAGG ATGCGGTGGA GGCGGCGCAG CGCGGCGTCT ATGACGTGCT CATCGTCGAT ACGGCGGGGC GTCTGCATGT GGACGGCGAG ATGATGGCGG AGGCACAGGC ACTGACGGCG GCGGTCAAGC CGGTGGAACT GCTCTTTGTG GTGGATGCCA TGACCGGTCA GGACGCGGTG AATACCGCCA AGGCCTTTAA TGACGCTCTG CCGCTGACCG GCGTGATTCT CACCAAGGCG GACGGCGACG CCCGCGGTGG CGCGGCTCTA TCGGTGCGAG CCATTACCGG CAAGCCCATC AAGTTCATCG GTATCGGTGA GAAAATTCGC AAGGGTCTGG AACCGTTTTA TCCCGAGCGC ATGGCCTCGC GCATTCTGGG GATGGGTGAC ATCGTCAGTT TGGTGGAGCA GGTCCAGCAG GATGTGGATG AGGATCAGGC CCGGAAAATG ACCCAGAAGT TGCGCAGCGG CAAGGGCTTC GATCTGGAAG ACTTCCGTGA GCAGTTGCGT CAGCTCGAGC GCATGGGCGG TATGGCCAGC ATCATGGACA AGCTGCCGGG TATGGGTGAG TTGTCCGCCG AGGCGCAGAG CGCGATGCAG GATGGCAAGC CCATGCGCCG CCTGGAAGCC ATCATCAACT CTATGACGCC CGGCGAAAGA CATCATCCGG ACATCATCAA GGCCTCGCGA CGGCGGCGGA TTGCTGCGGG TTCCGGGACG ACCGTGACCG AAGTGAACAA GCTCCTAAAG CAGTTCGAAA TGATGCAAAA GATGTTCAAA AAAATGGGTA AAGGGGGCCG GGGACTCAGC CGTTTGCTGG GGATGAATCC CAAATCCATG CTGAAGGGCG GTTTACCCTT CCGTTAG
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Protein sequence | MFDNLTQKLT QTFKNLRGQG RLSEDNIRDA LRDVRLALLE ADVALPVVKD FINNVRESAM GEAVVKSLTP GQVFVKIVHD ELVQLMGAHN DSLDLSARPP AVILLAGLQG SGKTTTSAKL ALWLKDKEKK RVLMVSTDVY RPAAMEQLVH LGKDIEVDVF PSSPGQQPVR IAQDAVEAAQ RGVYDVLIVD TAGRLHVDGE MMAEAQALTA AVKPVELLFV VDAMTGQDAV NTAKAFNDAL PLTGVILTKA DGDARGGAAL SVRAITGKPI KFIGIGEKIR KGLEPFYPER MASRILGMGD IVSLVEQVQQ DVDEDQARKM TQKLRSGKGF DLEDFREQLR QLERMGGMAS IMDKLPGMGE LSAEAQSAMQ DGKPMRRLEA IINSMTPGER HHPDIIKASR RRRIAAGSGT TVTEVNKLLK QFEMMQKMFK KMGKGGRGLS RLLGMNPKSM LKGGLPFR
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