Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2475 |
Symbol | |
ID | 6878473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2441324 |
End bp | 2441806 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642790332 |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_002220877 |
Protein GI | 198284556 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGGAC GTGTCTCCGG CATCTACGGT GTGCGCGGCA TGGTGAAAGT CTTTTCTTTC ACTGAGTCGC GTGACAGTAT CCTCGACTAC TCGCCCTGGT ACCTCGGGCC CGACCGGCGC CCCTGGGTGC TGGAAGATGG ACGTATGCAG GGCGAGGGTG TGGTGGCCAA GCTGGCGCAG GTAGAGGACC GTGAGCAGGC GCGCGCCCTT ATCGGGCAGG AGATCGCCGT GATCCGGGCT GATTTGCCTG AGTTGGGTGC CGGTGAGTTT TACTGGAGTA CGCTGACCGG GCTTCGGGTG CTGAACCGGG AAGGCATCGT TCTGGGCACC GTGTCCGCTT TTCTGGAGAC CGGCGCGAAT GACGTGATGG TGATCGACGA TGGCAAGGGT GGTGAACTGC TCATTCCGTG GTCGGCCGAA GCCTCTGCGG GCGTGGATTT GCCTGCCGGG CAGATTGTCG TGGACTGGCA AGCCGACTGG TGA
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Protein sequence | MLGRVSGIYG VRGMVKVFSF TESRDSILDY SPWYLGPDRR PWVLEDGRMQ GEGVVAKLAQ VEDREQARAL IGQEIAVIRA DLPELGAGEF YWSTLTGLRV LNREGIVLGT VSAFLETGAN DVMVIDDGKG GELLIPWSAE ASAGVDLPAG QIVVDWQADW
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