| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2471 |
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| Symbol | |
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| ID | 6878469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2438004 |
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| End bp | 2438912 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790328 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_002220873 |
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| Protein GI | 198284552 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAGTG CCGGTCTGTC CGCCGAACGG CAGCGGATCG ACACCTTTCT TGACGCCCTG
TGGCTGGAAA AAAACCTTGG TGAAAATACC CTGACCGCTT ATCGTCAGGA TTTGCTGCAG
GTAGCCGCCG CGCTCGCGGA GTGGGATTTG ACCCTGACTA CCGCTGACGA CGGCGCCCTG
GCGCGCATAC TGGGACAGAG GTTACAGTCC GGGGCCGCCC TGCGCTCCGT AGTCCGCCTG
CTCTCCAGTG TGCGCCGTTT TTACGGTTAC GCGGAGCGGG AGGGCTGGGT ATCCCGTGAC
CCCAGTCGCA ACCTGCAGAG TCCTCGTATC GGCCGCGTAC TACCCCACGT TCTCAGCGAA
ACGGAAATAG AGGCCCTGCT GGCGGCCCCC GATTGTACCC ACCCGTTGGG CCTGCGTGAC
GCAGCCATGC TGGAACTGAT GTACGCCTGC GGTTTGCGGG TATCGGAACT GGTGAATCTG
GAGACGCGCC AAGTGGACCT CAGCGCCGAT ATGGTGGTGG TCTTTGGCAA GGGTCGCAAG
GAACGCTTGG TGCCCATGGG AGAAGTGGCG GCCGGCCGCG TGACCCAGTA TCTGCAGATG
GGTCGCCCGC AGATACTGGG TCAGCGCATC AGTGCCGCCC TTTTTGTGAC TGGGCGGGGG
GCTGCCATGA CGCGCCAGCG TTTCTGGCAA AACATTGAAC GTTACGCCCG GTCTGCGGGA
ATCACTCAGA CCGTATCGCC GCACAGCCTG CGTCACGCCT TTGCCACCCA CCTGCTGAAT
CACGGCGCGG ACCTGCGCAG TGTGCAGTTG ATGCTGGGAC ACGCCGCCCT GTCCACCACG
GAGATATATA CCCATGTGGC GCAGGCGCGG CTCAAGGCGC TGCACGCGAA GCATCACCCG
CGCGGGTGA
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| Protein sequence | MPSAGLSAER QRIDTFLDAL WLEKNLGENT LTAYRQDLLQ VAAALAEWDL TLTTADDGAL
ARILGQRLQS GAALRSVVRL LSSVRRFYGY AEREGWVSRD PSRNLQSPRI GRVLPHVLSE
TEIEALLAAP DCTHPLGLRD AAMLELMYAC GLRVSELVNL ETRQVDLSAD MVVVFGKGRK
ERLVPMGEVA AGRVTQYLQM GRPQILGQRI SAALFVTGRG AAMTRQRFWQ NIERYARSAG
ITQTVSPHSL RHAFATHLLN HGADLRSVQL MLGHAALSTT EIYTHVAQAR LKALHAKHHP
RG
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