Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2464 |
Symbol | |
ID | 6878462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2429572 |
End bp | 2430864 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642790321 |
Product | protein of unknown function DUF445 |
Protein accession | YP_002220866 |
Protein GI | 198284545 |
COG category | [S] Function unknown |
COG ID | [COG2733] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.994281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGCTG TTAAACCAGA TCGGACTCGA AGACTACGTG TGCTGCGCCG CTGGGCGCTG GGTTTGTTGC TGGGGGCGCT GGCGCTGTTT CTGGTGGCGG CCGCACATGA CTTTGCCGGG CCCTGGGCCT GGGTGGGGGC CTTTGCGGAG GCGGCCATGG TGGGCGCTTT GGCGGACTGG TTTGCGGTGG TCGCACTCTT TCGGCATCCC CTGGGATTGC CCATTCCACA CACGGCGATC CTGCCGCGGA ACAAGGCGCG TCTGGCGCGC CGTCTGGCGG AGTTCATCCG CGATCACTTT TTGGAGGCCG AGGCCATTGT GCGCCTGTTG CGACGCGCCG ATCCGGCCAC CTGGCTGGCG CAGTGGCTGA GTGATGCCGG GAACAGCGCG CTGCTGGCCC GGCAGATGAC GGTCTTGCTC CAACAAGGGT TGGCCCTCAG TGACGACCGC GAATTGCGCA GCGCCCTGCG TGCCGCGTTG GGGCGGCAAC TGCAGGGCAT GGACGGTGCG CGCTGGGTGG GGAGTATTCT GGCGTTGCTG ACCGAAGATC ACCGCCATCA GACCCTGCTC GACGATGGCA TTCAGCGCCT GCGTCGCTGG CTGGATGGTG AAGATACCCA AAGCCTGCTG GCGGATCAGA TCGGGGCGAT GCTCGAGCGC GCCTACCCGA CCCTGTTCGC GTGGATGGGG ACAGTCATGG ACCCGGCCAC GCTGAGTGAG AATCTGGCCC GCAATCTGGT GAAGGCGGCG CATCAGTTGT TGCAGGAAAT CGCGGATGAC CCGGAGCATC CGCGCCGTCT GGCTTTTGAC CGATGGATGC AGGATGCCAT TCTGCGTTTG CAGACGGATG CCGCCTTCCA GGCGCGGGTG CAGCGCTGGC AGCATGGTCT GATCACTCAT CCGGCGGCGC AGGCCTATGT GGATGGCCTG CTCGGCGATT TGCGTTCCTG GCTGGAAACG GACCTGCAGC GCCCGGATTC CCGGCTACAG GGGCAGGTGC AGCGTCTGTC CCAGCAACTG GGCCTTTTCC TGGGCGAGCA ACCGGCATTG CGCGATGCAC TCAATGGCTA CCTGGAGGAC AGCGCCCGTC GTTTGGCGCC TGCCCTGCGC GATGGTCTGG CCCAGCATAT CGAAGCGACG ATACATGCCT GGCCGGATAA GGACATGGTC CGCCTCCTGG AGGAAGGGGT GGGTACGGAT CTGCAGTATA TTCGTGTCAA CGGGACGCTG GTGGGCGGAA TGATCGGTAT TGCCATTCAT GCCCTGGCTC TGGCGGTGCC GCTGCTGATA TAG
|
Protein sequence | MTAVKPDRTR RLRVLRRWAL GLLLGALALF LVAAAHDFAG PWAWVGAFAE AAMVGALADW FAVVALFRHP LGLPIPHTAI LPRNKARLAR RLAEFIRDHF LEAEAIVRLL RRADPATWLA QWLSDAGNSA LLARQMTVLL QQGLALSDDR ELRSALRAAL GRQLQGMDGA RWVGSILALL TEDHRHQTLL DDGIQRLRRW LDGEDTQSLL ADQIGAMLER AYPTLFAWMG TVMDPATLSE NLARNLVKAA HQLLQEIADD PEHPRRLAFD RWMQDAILRL QTDAAFQARV QRWQHGLITH PAAQAYVDGL LGDLRSWLET DLQRPDSRLQ GQVQRLSQQL GLFLGEQPAL RDALNGYLED SARRLAPALR DGLAQHIEAT IHAWPDKDMV RLLEEGVGTD LQYIRVNGTL VGGMIGIAIH ALALAVPLLI
|
| |