Gene Lferr_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2464 
Symbol 
ID6878462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2429572 
End bp2430864 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content65% 
IMG OID642790321 
Productprotein of unknown function DUF445 
Protein accessionYP_002220866 
Protein GI198284545 
COG category[S] Function unknown 
COG ID[COG2733] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.994281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTG TTAAACCAGA TCGGACTCGA AGACTACGTG TGCTGCGCCG CTGGGCGCTG 
GGTTTGTTGC TGGGGGCGCT GGCGCTGTTT CTGGTGGCGG CCGCACATGA CTTTGCCGGG
CCCTGGGCCT GGGTGGGGGC CTTTGCGGAG GCGGCCATGG TGGGCGCTTT GGCGGACTGG
TTTGCGGTGG TCGCACTCTT TCGGCATCCC CTGGGATTGC CCATTCCACA CACGGCGATC
CTGCCGCGGA ACAAGGCGCG TCTGGCGCGC CGTCTGGCGG AGTTCATCCG CGATCACTTT
TTGGAGGCCG AGGCCATTGT GCGCCTGTTG CGACGCGCCG ATCCGGCCAC CTGGCTGGCG
CAGTGGCTGA GTGATGCCGG GAACAGCGCG CTGCTGGCCC GGCAGATGAC GGTCTTGCTC
CAACAAGGGT TGGCCCTCAG TGACGACCGC GAATTGCGCA GCGCCCTGCG TGCCGCGTTG
GGGCGGCAAC TGCAGGGCAT GGACGGTGCG CGCTGGGTGG GGAGTATTCT GGCGTTGCTG
ACCGAAGATC ACCGCCATCA GACCCTGCTC GACGATGGCA TTCAGCGCCT GCGTCGCTGG
CTGGATGGTG AAGATACCCA AAGCCTGCTG GCGGATCAGA TCGGGGCGAT GCTCGAGCGC
GCCTACCCGA CCCTGTTCGC GTGGATGGGG ACAGTCATGG ACCCGGCCAC GCTGAGTGAG
AATCTGGCCC GCAATCTGGT GAAGGCGGCG CATCAGTTGT TGCAGGAAAT CGCGGATGAC
CCGGAGCATC CGCGCCGTCT GGCTTTTGAC CGATGGATGC AGGATGCCAT TCTGCGTTTG
CAGACGGATG CCGCCTTCCA GGCGCGGGTG CAGCGCTGGC AGCATGGTCT GATCACTCAT
CCGGCGGCGC AGGCCTATGT GGATGGCCTG CTCGGCGATT TGCGTTCCTG GCTGGAAACG
GACCTGCAGC GCCCGGATTC CCGGCTACAG GGGCAGGTGC AGCGTCTGTC CCAGCAACTG
GGCCTTTTCC TGGGCGAGCA ACCGGCATTG CGCGATGCAC TCAATGGCTA CCTGGAGGAC
AGCGCCCGTC GTTTGGCGCC TGCCCTGCGC GATGGTCTGG CCCAGCATAT CGAAGCGACG
ATACATGCCT GGCCGGATAA GGACATGGTC CGCCTCCTGG AGGAAGGGGT GGGTACGGAT
CTGCAGTATA TTCGTGTCAA CGGGACGCTG GTGGGCGGAA TGATCGGTAT TGCCATTCAT
GCCCTGGCTC TGGCGGTGCC GCTGCTGATA TAG
 
Protein sequence
MTAVKPDRTR RLRVLRRWAL GLLLGALALF LVAAAHDFAG PWAWVGAFAE AAMVGALADW 
FAVVALFRHP LGLPIPHTAI LPRNKARLAR RLAEFIRDHF LEAEAIVRLL RRADPATWLA
QWLSDAGNSA LLARQMTVLL QQGLALSDDR ELRSALRAAL GRQLQGMDGA RWVGSILALL
TEDHRHQTLL DDGIQRLRRW LDGEDTQSLL ADQIGAMLER AYPTLFAWMG TVMDPATLSE
NLARNLVKAA HQLLQEIADD PEHPRRLAFD RWMQDAILRL QTDAAFQARV QRWQHGLITH
PAAQAYVDGL LGDLRSWLET DLQRPDSRLQ GQVQRLSQQL GLFLGEQPAL RDALNGYLED
SARRLAPALR DGLAQHIEAT IHAWPDKDMV RLLEEGVGTD LQYIRVNGTL VGGMIGIAIH
ALALAVPLLI