Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2447 |
Symbol | |
ID | 6878445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2408579 |
End bp | 2409643 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642790304 |
Product | glycoside hydrolase family 3 domain protein |
Protein accession | YP_002220849 |
Protein GI | 198284528 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00545461 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGTAC GGAATGAACG GCGGCACCCT GCGCGGGGCC CGCTGATGGT CGATATCGCC GGCCTGCGGC CCACGGCCGC CGAATGCGCC ATGCTGCGCC AGCCTGCCGT CGGCGGTGTC ATCCTTTTTG CCCGCAACTG TGCGGACGCC GGACAGGTGC GTGCCCTGTG CGCGGAGCTG CATGCCTTGC GCACCACTCC CCTTCTTGTC GGGATAGATC AGGAAGGCGG ACGGGTACAG CGTCTGCGTG CGGGGGTGAC GCGCTTCCCG CCCATGGCGA CCCTGGGGCG TCTGGCGGAT CGTGACGGGT TGGAGCGTGC GCTGGTGGCG GCCGAAGACT GGGGCCTTCT GCTCGGTACG GAACTTCGGG CTCTCGGCGT TGATCTGGAT TTTACCCCCT GCGTGGATCT GGATCGCGGT ATCTCTGCGG TGATCGGCGA TCGCGCCATC CACCGCGATC CCGTATGGGT GGGCGCTATT GCGGCAGCAC TCTGGAAGGG TATGGCCCGG ACCGGCCTGC AGGGGGTCGC CAAGCATTTT CCCGGTCACG GGGCGGTGGC CGCAGACTCT CATCTCGATT TGCCGCTGGA TGATCGTCCG TTCAGCGCCA TTCAGGAAGA CCTCCAGCCC TTTGCGGCCC TGATCGCCGC CGGAATTCCG GCGATCATGC CCGCGCATTG TCTGTATCCC CGGGTGGATG GTGAACACCC GGCCGGATTC TCTCCGCGTT GGTTGCAGGA CGTTCTCCGT AAAGAGATGG GCTTCACCGG TGTGGTGGTC AGTGACGACC TCAGCATGGC GGGTGCCCAT GGTGCGGGCG GCGTGGCGGC CCGGGTGGAT GCGGCGCTGA CGGCGGGCGC CGACCTGTTG CTGGTCTGTA ATGATCCGGA AGGTGCGGAA ACCGCCATCG CGCATGTACG GTCCAGGGAT GCACTCCCGA CCGGTGACCG CCTGGAGCGT CTCGCCGGTA ACGCCGCCAC GGCCGCCCTG TCCGCGGCTG ACCGGGTGCG CTGCCTGCAG CAGATCGAAG AATTACGGGC GCTCGCCCCC GGATACACTG ACTGA
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Protein sequence | MPVRNERRHP ARGPLMVDIA GLRPTAAECA MLRQPAVGGV ILFARNCADA GQVRALCAEL HALRTTPLLV GIDQEGGRVQ RLRAGVTRFP PMATLGRLAD RDGLERALVA AEDWGLLLGT ELRALGVDLD FTPCVDLDRG ISAVIGDRAI HRDPVWVGAI AAALWKGMAR TGLQGVAKHF PGHGAVAADS HLDLPLDDRP FSAIQEDLQP FAALIAAGIP AIMPAHCLYP RVDGEHPAGF SPRWLQDVLR KEMGFTGVVV SDDLSMAGAH GAGGVAARVD AALTAGADLL LVCNDPEGAE TAIAHVRSRD ALPTGDRLER LAGNAATAAL SAADRVRCLQ QIEELRALAP GYTD
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