Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2433 |
Symbol | |
ID | 6878431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2397801 |
End bp | 2398457 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790291 |
Product | FMN-binding negative transcriptional regulator |
Protein accession | YP_002220836 |
Protein GI | 198284515 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00303402 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000627876 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTATTGTC CTGAGTCATT TGCAGAAAAC CGCCCGGAAA TCCTGCGGGC ACTGATTCAG TGTTATCCCC TCGCGACACT GGTCAGCATG GGCGGTAATA GTCTGGAGGC GAATCATATT CCCTTGTACC TCGTACCTGG TGAAGGACCG CAACCGGTGC TGCAGGGACA CGTGGCACGC GCCAATCCCC TGTGGCGAGA GACGCTCCCG GACGATGAGG TGCTGGTCAT CTTTCAGGGG CCGCAACACT ACATCAGCCC CTCGTGGTAC GCGACCAAGG CGGAAACCGG CAAGGTGGTG CCTACTTGGA ACTATGCCGT CGTCCATGCC CACGGGCCGC TGCAGGTCAG GGACGATCCC TATTGGGTAC GGCAACAGAT GGTCGCCCTG ACCGCGCAGC AGGAGAACAG TTTCACCCCG CCCTGGGAGG TGGGTGATGC GCATCGGGAT TTTACGGATC GTCTCATCCA GCAGGTAGTG GGCATAGAAA TCCCCATCTC CCGCTGGGTG GGCAAGTGGA AAATCAGTCA GAACCAGCCG GTTGGCAACC GTGACAGTGT CGTCGCGCAC CTGGAGCAGC AAAACCAAGC TGGCTCTGAG GCCATGGCTG AATATATTCT GGCCGGCGTG AAAGGCGGCA AAAGGGACCA TCCTTGA
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Protein sequence | MYCPESFAEN RPEILRALIQ CYPLATLVSM GGNSLEANHI PLYLVPGEGP QPVLQGHVAR ANPLWRETLP DDEVLVIFQG PQHYISPSWY ATKAETGKVV PTWNYAVVHA HGPLQVRDDP YWVRQQMVAL TAQQENSFTP PWEVGDAHRD FTDRLIQQVV GIEIPISRWV GKWKISQNQP VGNRDSVVAH LEQQNQAGSE AMAEYILAGV KGGKRDHP
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