| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2425 |
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| Symbol | |
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| ID | 6878423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2392363 |
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| End bp | 2393106 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642790283 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002220828 |
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| Protein GI | 198284507 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00188516 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGGTA ATTCGCGCGT CGCACTGGTT ACCGGCGCCA CCTCCGGCAT TGGTCTGGCT
ATCGCGCAGC GTTTAACGCA GGCGGGATAT TGGGTGGCCC TGCATTCCCG CGCTTCCTCC
GCTGCGGGTC TACAAGCGGC GGCAACGCTG GCGGGTGCCC ACTATTTTCA GGCAGACTTG
CTGGAGGATG GTGAGCGCAG GGATCTGATC AATCAGGTGT ATACGCACTA TGGTCGGCTC
GACGTGCTGG TCAATAACGC GGGTGAGTCC AGCATGATTC CGCATGATGA TTTACAGGCC
GCGACACCGG ACCTCTGGCA CCGCCTCTAC GAACTCCATG TGGTGGCGCC CTGGCAACTC
GTCGCGCTGA GCGAACCCTA TCTGCGCGCG GCATCGACGG CCGAACACCC GGCGGCGGTA
TTAAATATCA GCTCTCATGC CGGTGTGCGA CCCAAGGGTG CTTCCATACC TTACGCCGCC
AGCAAGGCCG CATTGATTCA TGTCACCCGC TTACTCGCCA AAACCCTGGG ACCCGATATC
CGGGTGAACG CTATCGCCCC GGGGCTGGTG GATACGCCGC TGACCGAAGA TTGGGCGACC
ATTCGCGAAC AATGGATTCG CGATGCCCCC ATGGGTCGGA GTGCGCGCCC TGGCGACGTC
GCGGATGTTG CCATGATGCT GACCGAATCG AGCTATCTGA CGGGAGAGGT GATTGTGGTG
GACGGCGGGA TGAACCTGCT TTAA
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| Protein sequence | MTGNSRVALV TGATSGIGLA IAQRLTQAGY WVALHSRASS AAGLQAAATL AGAHYFQADL
LEDGERRDLI NQVYTHYGRL DVLVNNAGES SMIPHDDLQA ATPDLWHRLY ELHVVAPWQL
VALSEPYLRA ASTAEHPAAV LNISSHAGVR PKGASIPYAA SKAALIHVTR LLAKTLGPDI
RVNAIAPGLV DTPLTEDWAT IREQWIRDAP MGRSARPGDV ADVAMMLTES SYLTGEVIVV
DGGMNLL
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