| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2423 |
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| Symbol | |
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| ID | 6878421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2390246 |
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| End bp | 2391736 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642790281 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002220826 |
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| Protein GI | 198284505 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00245966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCAAC AGGTACTCGA CCGTGAAGCT TGCTATCGCG CCCTTCTTAC CCGCGATGCA
CGGTTTGACG GCCAGTTCTA CACGGCGGTT CTCTCCACGG GGATCTATTG CCGTCCGATT
TGCCCTGCGC GACCGCCGAA GATCGAAAAT TGCCTCTTTC TTCCCAGCGC GGCGGCAGCC
CATCAGATGG GATTCAGGCC ATGTTTGCGG TGCCGCCCCG AGGTAAATCC GGCCAAGCAA
CGCACCTGGG CTGGTTCCAA CCTGGTTGAC CATGCCTTGC GGTGGATCAC TGAGGGCGCC
TTCGACGATG ACTGCGTGGA ACATTTGGCT GAGCGATTGG GAGTCAGCGG ACGACATCTC
CGACGGCTAT TCGCCCGCGA GCTCGGCACC ACGCCGATAG CCGTAGCACA GGCCCAGCGT
GTCCTTCTGG CGAAAAAAAT GATTGTGGAA ACAACGCTGT CGATGACGGA TGTTGCCATC
GCCGCTGGCT TCGGTAGTGT CCGCCGATTC AACGATGCCA TACAACGAAA CTATGGAAGG
GCTCCGAAAA CAATGCGGCA CACCTCGACA TCAAACGGCA ACATGACTGC GGGCATCACG
CTGAAGCTTC CGTTCACCCC TCCCTATGAC TGGGAGGCCA TGATCGATTT TCTCGCCGGA
AGGGCCATCC CCGGGGTAGA AGCCGTGGAC GCCGGGAAAT ATGCCCGCTC ATTTCAATGG
GATGGCATGC ACGGCGTTGT CGAAGTCCAG CAGGAGTCGG AAACCAATCA TCTTTTAGCC
ACTATTTATG CCACTGAAGT TCCCCCCATA GGTATGATTG TCGCAAGACT CCGCCGCTTG
TTTGATCTGG ATGCCAATAT CGGGATGATT GATGCGCATC TTTCCGCAGA CCCACGCCTG
GCAGCGCGGG TGAGGGAAAG ACCCGGGCTC AGGGTACCTG GCAGTTGGGA TCTCTTTGAA
CTAACGGTCC GGGCAGTATT GGGCCAACAA ATCAGCGTCG CTGCGGCCAC CACGCTGTCC
GGTCGCCTCG TTGCGACCCT TGGAGAACCC ATCAAGGGAG ATTTCGGAGC GGCTTTGGAA
AAAACCGGCA TCTCCATGAT TTTCCCGTTA CCCGCCGCTG TCATGACTGC CAACCTGACC
CCTATTGGAT TAACTCGCGC GCGGGAAAAG GCTTTGCAGT CCCTCGCTAC AGCCGTGCAT
GAGGATCGGC TTTTCTTTCA GCCTCAACCA TCACCCAATA AAACCATAGA AAAACTCTGT
GAGCTGCCCG GTATCGGCCC ATGGACGGCT CACTATATCG CCATGCGCGG ATACCGCGAC
CCGGACGCAT TCCCGCATTC GGACTTGGGG TTGCTGCGTG CCCTGGAAAC AAAGAACGGC
CGCCCTACCC CCGCTGAACT GCTGGCCCTC GCCGAGGCAT GGAGGCCCTG GCGCGCCTAT
GGGGCTATGC GATTGTGGGT TCAACCGAAG ATATTGCCGG CCGCACGCTG A
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| Protein sequence | MNQQVLDREA CYRALLTRDA RFDGQFYTAV LSTGIYCRPI CPARPPKIEN CLFLPSAAAA
HQMGFRPCLR CRPEVNPAKQ RTWAGSNLVD HALRWITEGA FDDDCVEHLA ERLGVSGRHL
RRLFARELGT TPIAVAQAQR VLLAKKMIVE TTLSMTDVAI AAGFGSVRRF NDAIQRNYGR
APKTMRHTST SNGNMTAGIT LKLPFTPPYD WEAMIDFLAG RAIPGVEAVD AGKYARSFQW
DGMHGVVEVQ QESETNHLLA TIYATEVPPI GMIVARLRRL FDLDANIGMI DAHLSADPRL
AARVRERPGL RVPGSWDLFE LTVRAVLGQQ ISVAAATTLS GRLVATLGEP IKGDFGAALE
KTGISMIFPL PAAVMTANLT PIGLTRAREK ALQSLATAVH EDRLFFQPQP SPNKTIEKLC
ELPGIGPWTA HYIAMRGYRD PDAFPHSDLG LLRALETKNG RPTPAELLAL AEAWRPWRAY
GAMRLWVQPK ILPAAR
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