Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2357 |
Symbol | |
ID | 6878352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2331099 |
End bp | 2331758 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642790217 |
Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
Protein accession | YP_002220765 |
Protein GI | 198284444 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.635649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000842061 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCGAGAA GTAAATCCAG TGAGAAGTGG CTGAAGGAGC ATTTTAAAGA CCCATTTGTG CAGCGCGCTA TGAAAGAGGG GTATCGCTCG CGGGCAAGCT ACAAATTGCT GGAGATTCAG CAGAAGGATC ACCTGATCCG CCCGGGTATG CGGGTGCTGG ATGTGGGCGC GGCGCCGGGT GGCTGGACGC AGGTGGCGGC GCCGTTGATC GGCAGGAAGG GGCGACTGGT GGCGGTGGAT CGCCTGGCAA TGGACCCGGT GGCAGATGCC ACGGTCATCT GCGGCGACGT CTACGACGAC GCCATACTGG CTGCCTGCCA GGAAGCCCTA CCGGGCGGCG CTGACCTGAT CATGAGTGAC ATGGCGCCCA ACATGTCCGG TATTGCCAGT GTCGATCAGG CCCGCGCCAT TGATCTCGCG GAGCTGGCTC TGGACATGGC CCATCGCTGG CTGGTGCCGG GCGGAGCGCT GCTGATCAAG GTGTTTATGG GGTCCGGCGC GGAAGAGTTG CGCCGGGCGC TGCGCCGAGA CTTCAAGAAG ATCGTGGTAC GCAAACCGGA GGCCTCGCGT GCGCGCTCTA CGGAGCAGTA CTGGCTGGCA CTGGACTTTC AGGGGGTTGC GCAGGAAAGG TTGGACAATG GTGGGGCGAG TTCCCTATAA
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Protein sequence | MARSKSSEKW LKEHFKDPFV QRAMKEGYRS RASYKLLEIQ QKDHLIRPGM RVLDVGAAPG GWTQVAAPLI GRKGRLVAVD RLAMDPVADA TVICGDVYDD AILAACQEAL PGGADLIMSD MAPNMSGIAS VDQARAIDLA ELALDMAHRW LVPGGALLIK VFMGSGAEEL RRALRRDFKK IVVRKPEASR ARSTEQYWLA LDFQGVAQER LDNGGASSL
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