Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2327 |
Symbol | |
ID | 6878321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2305381 |
End bp | 2306352 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642790186 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_002220735 |
Protein GI | 198284414 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.296928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAATA CCGCGAAGAT CGTGATCGCG ATACTGGTCT TGCTGGCCAT CGCCTTGGGG GTGTCCGCCT ATCTGGTCAG CCAACCCAGT CCGGTAGTGC AGAGCAAAAC CAGTGCGGCG GCGCCGCAGC AGCCGACGGC GGGGGTGGCC GTGGTGGTGG CGGCCAAAAC CCTGTCGGCG GGATTCCCCA TCCCGCCGGA CGGGGTCAAG GTCCTGCATT ACCCCGAATT TCCCGCCGGC GCCTTCCATG AGACCGCGCA CGTCGTCGGC AAGGTGCCGC AGGTGAACAT CGGCATGGGC GCCCCGGTGA TGTCCAGCAA CCTGTTGTCC GGTCTGGCCA CCCAGGTGCC CGAAGGGGAT GTGGCCATGG CCATCGACGT CAACAAGGCC ATCGCCGTGG GGGACCATCT GCAGCCCGGC GATTACGTCG ATGTCTTCAC CACCCTGGCC GGTGACCAGA TGACCATGCA CGGCGGCTGG CCGACCCAGA GCCGCCTGCT GCTGGCCGAT CTGCGGGTAC TGGCGGTGGG GCCGCAGACG GTGGTGCGCC ATGTCGCCCA GGGCGAGCCG TCGGCTTTTG GTCCGGCGGC CGGCTCGGCG GGCTCCAGCA ACCAGCCGCC CCGGGAGCCG CCCAGCACCG TGGTGCTGCA AGTGCCCGTC GCCTCCGCCG CGACCCTGGC GCTGGCCAGC GGTCAGGGCC ATCTCCTGCT CGCGCTGCGC AACCCCAAGG ACCATACCTT GCCCGATACC GGGGCCTTCC CGACTCCGTC GCCGGCGTTG CCGCCCGCGG AACTGCCCGT CGCGCAACGC AAGGCGGCCC TGGCAAAGCC GGAGAACCGG GCCTATGCCG GCCTGACCCT GCCGGGTCTG GCGGGCAAGA GCAAAGCGGC CGAGCGCGCG ATGCATCCGT TGCCTCCGCC GCCCATGATG GAGATCTATC AGGGTGGACA AAAAACAGCG GTACCCTACT GA
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Protein sequence | MGNTAKIVIA ILVLLAIALG VSAYLVSQPS PVVQSKTSAA APQQPTAGVA VVVAAKTLSA GFPIPPDGVK VLHYPEFPAG AFHETAHVVG KVPQVNIGMG APVMSSNLLS GLATQVPEGD VAMAIDVNKA IAVGDHLQPG DYVDVFTTLA GDQMTMHGGW PTQSRLLLAD LRVLAVGPQT VVRHVAQGEP SAFGPAAGSA GSSNQPPREP PSTVVLQVPV ASAATLALAS GQGHLLLALR NPKDHTLPDT GAFPTPSPAL PPAELPVAQR KAALAKPENR AYAGLTLPGL AGKSKAAERA MHPLPPPPMM EIYQGGQKTA VPY
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