| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2321 |
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| Symbol | |
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| ID | 6878315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2298648 |
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| End bp | 2299487 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642790180 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002220729 |
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| Protein GI | 198284408 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC GGAACCGTGC CCGTGGAATC CAGAACCTGA GCAGGGGGTT GGCCGTATTC
TGCATCCTGG CCGCCGGGGG GTGTGCCACC CATCCGTCGC CACCGGTCGT TGCCAACGCG
CCGGAGCCAA AGGTTTCCTC CTCCGATCTG CGGGGGTTGA GTCTGCAATT GATCCAGAAA
ATGGAAGCCG AGCAGAAGTG GTATGCGGCC ATTTCCTATC TGGACCGCTA CCTGAAAGAG
TGGCCGGCCT CGGATCAGAC CGATCTGTTG CGTGCCCGCG CCCTCGCGGC TACGGGTGAG
CCGGCCCAGG CCGAGCGCTA TTTTCGGCGG GTATTGGGTA CTCCCCTCGC CGCACAGGGG
TACCAGGGTC TGGGCCTCAT TGCCGCGCGC GGCGGCGACA TCACCCGGGC CATCCCGCTT
TTCCAACGCG CCACACGGGA GGATCCCACG AACGCCGGGA TACTGAATGA TCTGGGTTAC
GCCGCCCTGC AGGGCAAGGC CTGGAATGTC GCGCGCAATG CCCTGTTTCG CGCCGGAGAG
CTCGCCCCGC AGGACGAGCG GGTGTGGAGC AATATCGCCC TGTACTACCT GCTGCGCGGC
GATAGCTTCC GGGCGCAGCA GATCATGGGT GCGCACGATT TTAGTTGGAC GGTCTCCCAG
CGCATCCGCC GCGAAGCCGA CCAGATGACG GGCGTGCCCA CCCCCACCGG CGACCATCCT
TCCGCAGCGG CGCCCGCGCC CTCGGGAGCG GTCATGCCCG CATTCCCCAA TCCGCCGTTG
ACGCAATTGT TTTCTTCCGG TAATGCCGGG CCAGCCACCG AACCCAGGAG CGTGCCATGA
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| Protein sequence | MTARNRARGI QNLSRGLAVF CILAAGGCAT HPSPPVVANA PEPKVSSSDL RGLSLQLIQK
MEAEQKWYAA ISYLDRYLKE WPASDQTDLL RARALAATGE PAQAERYFRR VLGTPLAAQG
YQGLGLIAAR GGDITRAIPL FQRATREDPT NAGILNDLGY AALQGKAWNV ARNALFRAGE
LAPQDERVWS NIALYYLLRG DSFRAQQIMG AHDFSWTVSQ RIRREADQMT GVPTPTGDHP
SAAAPAPSGA VMPAFPNPPL TQLFSSGNAG PATEPRSVP
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