Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2304 |
Symbol | |
ID | 6878298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2277177 |
End bp | 2278565 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642790163 |
Product | beta-lactamase domain protein |
Protein accession | YP_002220712 |
Protein GI | 198284391 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.73146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGC AATTTTATGG TGCGGCGGGA GGGGTTACCG GGTCCTGTCA TTTTCTTCGC GTGGGCGATA AAAAGCTGCT CATCGACTGC GGCATGTTTC AGGGCGGGCA TGACCTGGAA GAAGAAAATC GCACCGAATT CGGCTTTGAC GCCAAGGATA TCGACTATCT GCTGCTGACC CATGCCCATC TCGATCACTG CGGGCGCATT CCGTTGCTGG TCAAACGCGG CTTTCGCGGC GAGATCATCA CCACGTCAGC CACCCGCGAA CTGGCGCGGC TGGTGCTCAT GGATGCGGCG GGGCTGGCGG CGGAAGAGGC GCGGCGCTCC AACCGACGTC ACCTGCGTCA GGGGGGGGCC GAATCGGCGC CCATCTATGA CATCACCGAC GTCCTCGATA CCATGGATCG CTTCGGACGC AGCGCGGATT ACGGACAAAA AATGGAGGTC TGCCCCGGCG TCAACGCGAC TTTCGGAGAT GCAGGTCATA TCCTTGGCTC CGCCTGGATA CTGGTAGAAG CCAGCGAAGC GGGCAGGCAG CAGCGCATCG TCTACTCCGG CGATCTGGGC AACCGCGGCA AGCCGATCAT CAACCCGCCC ACCCCCGCCC CCCAAGCGGA CGTCATCGTC ATGGAAACCA CCTATGGCGA CCGCCTGCAC AAGGCCATCG GACCCTCGGT GGACGAGTTG CGCGATGCCA TCCTCGACAC CCTGAAACGT GGTGGCAATG CCATCATCCC CACCTTCGCC CTGGAGCGCG CGCAGGATTT GCTGTATTAC CTGCGGGAAA TGATGAATGA CAACCAGATT CCCGCCAACC TGCCGGTTTT TCTCGATTCG CCCATGGCCA TTTCGGCTAC GGAGATTTTT CGCCGTCACC CGGAGTGCTT CAACCCCGGT ACCCGCGAAG GCCTGCAGCA CGGCGCCGAC CCCTTCGCCC TGCGCAACCT CCATTTCACC CGCGAAACCA GCGAATCCAT GGGCATCAAC CTGATCAAGG GCGGTGCCCT GATCATGGCG GGATCGGGCA TGGCGACCGG AGGGCGGGTC ACCCACCATC TCCGGCATAA CATCTGGCGT GAGGACAGCA GCGTGATCTT CGTCGGTTAT GCCGCCCAGG GGACGCTGGC GCGACGCATC ATCGACGGGG CCAAAACCGT GCGGATATTT GGTGAAGAAG TGCATGTCGC CGCCAGCATC TACACCATCG GCGGTTTCTC GGCCCATGCC GACCACGATG AACTTCTCGC CTGGTATGGT GACCAACGCC CGACACGCAC CGTTCTCGTC CATGGTGAGG ACAACGGCCG GGAGGGCATC GCCAAGGTAC TGCGGGCGCG GGGTTTGCAG GTGGATTGTC CGGTCATTGG CGATCGTTAT TCCCTCTAA
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Protein sequence | MEMQFYGAAG GVTGSCHFLR VGDKKLLIDC GMFQGGHDLE EENRTEFGFD AKDIDYLLLT HAHLDHCGRI PLLVKRGFRG EIITTSATRE LARLVLMDAA GLAAEEARRS NRRHLRQGGA ESAPIYDITD VLDTMDRFGR SADYGQKMEV CPGVNATFGD AGHILGSAWI LVEASEAGRQ QRIVYSGDLG NRGKPIINPP TPAPQADVIV METTYGDRLH KAIGPSVDEL RDAILDTLKR GGNAIIPTFA LERAQDLLYY LREMMNDNQI PANLPVFLDS PMAISATEIF RRHPECFNPG TREGLQHGAD PFALRNLHFT RETSESMGIN LIKGGALIMA GSGMATGGRV THHLRHNIWR EDSSVIFVGY AAQGTLARRI IDGAKTVRIF GEEVHVAASI YTIGGFSAHA DHDELLAWYG DQRPTRTVLV HGEDNGREGI AKVLRARGLQ VDCPVIGDRY SL
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