Gene Lferr_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2212 
Symbol 
ID6878203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2190728 
End bp2191456 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content63% 
IMG OID642790070 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_002220622 
Protein GI198284301 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.24952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCA GCATCCGCAG CGCATTGTTC TATGGGGGCT TTACGATCTG GACGCTGATC 
TGGGCGATTT TCAGTCTAGC CGTAGCACCA TTGCCGCTGT CGGCGCGGGT CTGGGCCAGT
CGTTTATGGG CGCGCGCTGG CGTCGGCTGG CTCCATTGGA GTTGCGGCCT GCGTTATCGG
GTTTCCGGTC TCGCCAATAT TCCCGCCACA CCTTGCGTCA TCGTCGCCAA TCATCAGTCG
GCGCTGGAAA CCCTGCTCTT TTGGTGCATC TTCCCGCAAC TCTCCTTTGT ACTGAAAAAG
GAACTCTTCC GCATCCCGGT GATCGGCTGG GGCCTGCGTC TGGCCTGGCC CATCGGGATC
GACCGCAACG GGGGCAGAGA AGCCCTGCTG CAGGTGATTG AACAGGGAAA ACTCCGGCTG
GCTGCGGGCT TTCATGTGGT CATTTTCCCG GAAGGCACCC GCCACCCCTG CGGCACCGTC
GGCCCCTTCA GCAGCACCGC TGCCGGGCTC GCCATCCGTG CTCAGGCCCC CCTTCTGCCG
ATCGCTGTGA ATAGCGGGTG TTTCTGGCCG CGTACAGACT GGCGAAAATG GCCGGGGGTC
GTCGAGGTGC GTATCGGCCC CGCGCTACCC CCCGCAGGTA AGGCGGGGTC CCTCAACCAG
CAGGCGCACG ACTGGATTAC GGCTGCAATT GCGGAGATGG GGACGAGGCC TGCCGCAAAA
GCGCTTTGA
 
Protein sequence
MIRSIRSALF YGGFTIWTLI WAIFSLAVAP LPLSARVWAS RLWARAGVGW LHWSCGLRYR 
VSGLANIPAT PCVIVANHQS ALETLLFWCI FPQLSFVLKK ELFRIPVIGW GLRLAWPIGI
DRNGGREALL QVIEQGKLRL AAGFHVVIFP EGTRHPCGTV GPFSSTAAGL AIRAQAPLLP
IAVNSGCFWP RTDWRKWPGV VEVRIGPALP PAGKAGSLNQ QAHDWITAAI AEMGTRPAAK
AL