Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2180 |
Symbol | |
ID | 6878171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2161615 |
End bp | 2162934 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642790038 |
Product | hypothetical protein |
Protein accession | YP_002220590 |
Protein GI | 198284269 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000540383 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAGCCT CAACGCTCAC ATCACATCAG CAAGCCAGCC TGCACCGTAT TGAGGTGCGG CCCATCCTGC CCACAGAGCG GGAACGCTGG AATACCCTGA TGCAAGCGCA TCATTATCGC GGCTTCCGCA CAATGGCGGG ACGCACCCTG CGCTACGTGG CCACGCTGGA TGACCGCTGG GTAGCGCTCC TCGGCTGGCA GGCCGCCGCT TACCAGTGTC AGGCGCGGGA GCAGTGGATC GGCTGGTCCT GGGTCTTGCG CCGCCAGCGC CTGCACCTCA TCGCCAATAA TGCCCGCTTT CTGATCCTGC CGAGGGAGTC CTTTCCCAAC CTGGCTTCCC GTATTCTTTC CCTGAACCTC CGCCGACTTT CTGCTGACTG GCAGTCGGTC TACGGTCACC CCATCGTGCT GGCCGAGACC TTCGTGGAAT CGCCTCGTTT TACTGGCGCC TGCTACCGGG CCGCAAACTG GGTGGACGTC GGCTGGACCA AGGGCTTTGC CCGCCGTCCC GGCGCAGGCT ATGTCTACCA CGGTCAGCCC AAACGGCTTC TGCTCTATCC CCTTCACCCC CAGGCGCGTA TCTGGCTTGC CCAGCCGCAG CCACAATCCG AATGGACGAA AACCCCTATG CAAACCGTCA CCCTGAGCGA TGCGCAAATG GAAGGCTTGC GCCAAATTTT CTTTCGCCTG CCCGATGCCC GCAGCCGTCT GGGCAAGCAG CATCCTCTCC CGGCCATTCT GACCATAGCC GTGGCCGCCG TCCTCACCCA GGCCCAAAGC TATATCGCGA TGGCCGAGTG GGCCGCCCGG CTGACCCAAG CGCAACTGAA GCGTATCCGC GCCCGATTCA ATCCCAGGAC GCAACGCTAT GTGGCGCCTT CCGAACCGAC CCTGCGTCGC GTCCTGCAAG GCGCCAACGT CACGGCACTG GATGCCGCTA TCGGTGCCTG GCTGCTGGGT ATCGCCGGAT TTGAAGCCGT GGCTGTCGAT GGCAAAGTGC TCAAAGGCGC GGTTCGGGAA GATGGGTCCC AGGTCCATCT CCTCAGCGCT TTCATGCACG GCCAGGGAGC CACCATTGCA CAAAAAGAAA TCGCCCGGAA AACCAACGAA ATCCCGGAGC TGCGCAGCCT GCTCAAAGAC GTCGACATCC AGGACAAGGT CGTCACCGCC GATGCTCTGC ATACCCAGCG AAAGACCGCT CGATTCCTCG TTGAAGACAA AAAGGCCGAT TATCTCTTCA CCGCCGTCAA AGGCAATCAG CGAAAACTCC GCAACAGCCT GATATGCCTC CCTTGGGGCG ATTTCCCCCC TCAGCGCTGA
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Protein sequence | MEASTLTSHQ QASLHRIEVR PILPTERERW NTLMQAHHYR GFRTMAGRTL RYVATLDDRW VALLGWQAAA YQCQAREQWI GWSWVLRRQR LHLIANNARF LILPRESFPN LASRILSLNL RRLSADWQSV YGHPIVLAET FVESPRFTGA CYRAANWVDV GWTKGFARRP GAGYVYHGQP KRLLLYPLHP QARIWLAQPQ PQSEWTKTPM QTVTLSDAQM EGLRQIFFRL PDARSRLGKQ HPLPAILTIA VAAVLTQAQS YIAMAEWAAR LTQAQLKRIR ARFNPRTQRY VAPSEPTLRR VLQGANVTAL DAAIGAWLLG IAGFEAVAVD GKVLKGAVRE DGSQVHLLSA FMHGQGATIA QKEIARKTNE IPELRSLLKD VDIQDKVVTA DALHTQRKTA RFLVEDKKAD YLFTAVKGNQ RKLRNSLICL PWGDFPPQR
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