| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2177 |
|---|
| Symbol | |
|---|
| ID | 6878168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2159704 |
|---|
| End bp | 2160150 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642790036 |
|---|
| Product | glycine cleavage H-protein |
|---|
| Protein accession | YP_002220588 |
|---|
| Protein GI | 198284267 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000000031691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGTA ACGGTTGCGA ATTCCGCGCC GAATTATATT ACGATCGGGA ATGCCAGATC
TGGGTGCGAC GCGAAGGCGA TGGCACGCTT ACGGTGGGTA TGACCGACAT ATCTCAGTCG
ATCGCCGGAA AGATTCTGCA TGTCCGGGTA CGCCGACCAG GGACACGTCG TCCGCTGGGT
AAGCCGGTTG CCACTATCGA GAGCGGAAAA TGGGCAGGTC CGGTTCCGAA TGTCTTCGAT
TGCGTGATCG AATCGGCCAA CGAAGATGTC CTGGAAGATC CCAATCTGCT CAATATCGAA
CCCTACGAAG CCTGGATCGC CCGGGTACGC CCGGTGGCTT CGGTGGACGC TGCGCTCAAA
AAGCTGTCTA CTGGGGACGT CGCCTTTGAG TTGTACCGGC AGCGCTGTCT GCGTGATGAC
ATTCATTGTG AGCGAGGAAT GCGATGA
|
|---|
| Protein sequence | MECNGCEFRA ELYYDRECQI WVRREGDGTL TVGMTDISQS IAGKILHVRV RRPGTRRPLG
KPVATIESGK WAGPVPNVFD CVIESANEDV LEDPNLLNIE PYEAWIARVR PVASVDAALK
KLSTGDVAFE LYRQRCLRDD IHCERGMR
|
|---|
| |