| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2170 |
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| Symbol | |
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| ID | 6878161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2152716 |
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| End bp | 2154059 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642790029 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_002220581 |
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| Protein GI | 198284260 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000480388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000685095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAAT CACGGATCTT AGGGATTGCG GTCGGCGCGA CGTTGGCGAT GGGCCTGTCG
GCCAGTGCGT TTGCTACAGA TGGTTATCAG TTGATCGGTA TCGGGCAGTA TGCCGTGGGT
ATGGCGGGCG CCGTTGTTGC GGCTCCGGAT GATCCCTTGT CTGCGGCTAT GAGCAACCCG
GCCGGATTGG CATTGATGAC GCCGCAGGCG GCATTCTCGG CGGAGATTTT CAACCCGGTC
CGCAAGACGA ATCTGGGTTT TGGCGAGATC GGCAGCCATA GCAATGTCTA CGGTGTTCCG
GCCATCGGCT GGGTGGCCCC GGCCTTTGCC AAGAACTGGG TATTCGGTGG CGGCGTTTAC
GGCACTTCTG GTCTGGGTGT CAATTATCTG CAGAATTTGG GTCCCGCCGG TTACGCGCAG
GCCTATAGCA GTATCACCTT CATGCAGATG GCGCCGTCCG TTGCGTGGAA GGCAAATGAT
CGTCTCTCCG TCGGCGCATC GTTGAATATT GCGGCGGAGC AGGGTTCTTT TCAGCAAACA
TTTTCCCAGA ACGCCCCTGT TGTCGTAGGT GTTGGTCCGA ATGGCCCCAT AACGCAAATG
ATGCCGCAGC AGGGTGGACT CAATCTGGCC ACCCCGAGTT GGGCCTATGG CGTCGGCGCG
ACCTTGGGCG TGTTGTATAA GGTGAATCAC ATGGTGACAT TGGGTGCGAC CTATAAATCA
CCCATCCTGT TCACCCCCAT GACCTGGCAA GCAGGTTTGC AGAACCAGGT GAGCCCGGCG
ACGGGTAATG GCGTGATCGG AGCACCTGGC CAGTATAGTG GGCACCTCAA CTATCCTCAG
CAGATCGCCC TGGGTCTCGC GATTCGTCCC ATCCGGCAGT GGTTGGTCAG CATCGAGGGA
CAATGGATCA ACTGGCACAA TACCATGAAC AATTTCACCA TTTTTGGACC ATGGACGGCA
TATCAGGGTG GCGCAGCAGT GGGAGGATTG TCCTCCATTG CACTCCCCAT GCACTGGAGC
AACCAGTGGG TGGCCAACTT CGGTACCCAG TATGACGTGA ACAACTGGTT GCAGGTACGT
GCCGGTTATA CCTGGGGTTC CAATCCCATC AGCAACAACA CCATCGCCTC CAATCTGATC
TTCCCGGCCA TCGTGCAGAA TGCCATCACC TTTGGCGCCA CGCAAAAGCT GGGCATGGGC
TGGAAGCTGA CGGAAGCCTA CATGCACGAG TTCTCCAATA CCAATACGGG TCCGGCCGGT
TCTTCCCCCT TCGGTGGTCC TATGCCTGCC AGTGCCACCA TGTACGAAAA CTCCTACGGT
ATTCAGGTCG GTTACGACTT CTGA
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| Protein sequence | MKKSRILGIA VGATLAMGLS ASAFATDGYQ LIGIGQYAVG MAGAVVAAPD DPLSAAMSNP
AGLALMTPQA AFSAEIFNPV RKTNLGFGEI GSHSNVYGVP AIGWVAPAFA KNWVFGGGVY
GTSGLGVNYL QNLGPAGYAQ AYSSITFMQM APSVAWKAND RLSVGASLNI AAEQGSFQQT
FSQNAPVVVG VGPNGPITQM MPQQGGLNLA TPSWAYGVGA TLGVLYKVNH MVTLGATYKS
PILFTPMTWQ AGLQNQVSPA TGNGVIGAPG QYSGHLNYPQ QIALGLAIRP IRQWLVSIEG
QWINWHNTMN NFTIFGPWTA YQGGAAVGGL SSIALPMHWS NQWVANFGTQ YDVNNWLQVR
AGYTWGSNPI SNNTIASNLI FPAIVQNAIT FGATQKLGMG WKLTEAYMHE FSNTNTGPAG
SSPFGGPMPA SATMYENSYG IQVGYDF
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