Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2156 |
Symbol | |
ID | 6878147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2140719 |
End bp | 2141366 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642790015 |
Product | SNARE associated Golgi protein |
Protein accession | YP_002220567 |
Protein GI | 198284246 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000142104 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGACA TTCATCACCT CGTGCGGATC CTGCTGCATT TCGACCAATA CCTGACCATC CTTCTTCAGG AATACGGGGC GTGGGTCTAT GCCCTGTTGT TCCTGATCCT CTTTGCGGAA ACGGGGCTGG TGATCATGCC GGTCCTGCCG GGCGACTCCA TGCTTTTTAT CTGCGGCACG CTTGCCGGGG TGGGCGTCAT GAGCGCACCC GGGCTGCTGG GTCTGCTGGT GACGGCCGCG GTGCTGGGTG ATGCGGTGAA TTACGCGGTG GGCCGCCGTT GGGGTGTCCA CCTCTTTGGT GGGCGCCTGC TCAATGTCCG GCACCTGGAT ACGACCCGGC GCTTCTATGT GCGACACGGC GGAAAAACCG TGATCATTGC CCGCTTTTTG CCGGTTATCC GAACCTTCGC GCCCTTTGTG GCCGGTATTG CCGCCATGCC CTATCGCCGC TTCCTGGGCT TCAATCTGAC AGGAGCGATC CTGTGGGTGG GGGGCTTGCT GGGTGCGGGA TATTTTCTCG GGCGCTTTCC TTGGGTCAAA AGCCACCTGA GTATGGTGCT TGTCGCCATC ATCGTGGTTT CGCTGATTCC CGCCGCGCTG GCATGGCTGC AGCAGCGTTT GCAGCCTGCC GGGACCCCTT CCCGCTAA
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Protein sequence | MPDIHHLVRI LLHFDQYLTI LLQEYGAWVY ALLFLILFAE TGLVIMPVLP GDSMLFICGT LAGVGVMSAP GLLGLLVTAA VLGDAVNYAV GRRWGVHLFG GRLLNVRHLD TTRRFYVRHG GKTVIIARFL PVIRTFAPFV AGIAAMPYRR FLGFNLTGAI LWVGGLLGAG YFLGRFPWVK SHLSMVLVAI IVVSLIPAAL AWLQQRLQPA GTPSR
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