| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2133 |
|---|
| Symbol | |
|---|
| ID | 6878124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2119840 |
|---|
| End bp | 2120715 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642789993 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002220545 |
|---|
| Protein GI | 198284224 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0992239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0302754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTACA ATATTCGTCT GGAATACCGA CCGGTAAAGC AGCCCCGCTA TGGCGGTCAC
ATCGAACGTT TATTGGGCAC CATGCTGAAA GAGATCCATG ATCTACCCGG AACTACGTTC
TCGTCGATAA AGGAACGGGA CGAATACGAC TCCGAGAAGC ACGCTACGAT GACCAAGTCG
GAATTTGAAA CATGGCTGGT TACCCTTATT TGCAAGGTGT ACCACAAGCG ACTTCATTCT
TCCATCGGTA TGACGCCCGA GAAAAAATGG GAACTGGGTA TCTTCGGGGA TAAAAACACC
CCGGGCCGTG GAATGCCCGC GTTACCTGCG AATCGTGAGG TATTGTTATT GGACTTTTTG
CCAATGTTCA AGCGGACTAT TCAGGCGGAT GGTGTTTCCG TAGATGGACT GACCTATTAT
GCGGACGTTA TCCGGCAGTG GATCAATGCG GATGACCCGG ACACCCCCGG TAAAAAGCGG
CAATTCATTT TCCGCCGTGA TCCCCGTGAT ATCAGCGTGA TCTGGTTCCA TGATCCTGAG
TTAAAAATGT ATTTTCGCAT CCCATACGCG GATCAGACGA TACCGAGCAT GAGTATCTGG
GAGTACCAGC AGGCGGTAAG CCGCGCTCGT CAGCAGGGTA TGAAATCTGT GGATGAGGCC
ATGGTGCTCC AAGCCTTGAA TGATCTGCGG CAACAGGTCG ATGGCTCGTC GGAAAGGACG
AAAAAGGCGC GTCGCCAACA GCAAAAGCGC AAGGAACACG CGAAAAAGGT ATCTCCATCA
CAGCCGCTGA CTTCAAATAG AAGCGTATTG GAGAAAGCGG CCCCTGCCTC GATGTTGCTG
AAAGGCGTTG TTAAGCCATT GGATGATATT GCATGA
|
|---|
| Protein sequence | MMYNIRLEYR PVKQPRYGGH IERLLGTMLK EIHDLPGTTF SSIKERDEYD SEKHATMTKS
EFETWLVTLI CKVYHKRLHS SIGMTPEKKW ELGIFGDKNT PGRGMPALPA NREVLLLDFL
PMFKRTIQAD GVSVDGLTYY ADVIRQWINA DDPDTPGKKR QFIFRRDPRD ISVIWFHDPE
LKMYFRIPYA DQTIPSMSIW EYQQAVSRAR QQGMKSVDEA MVLQALNDLR QQVDGSSERT
KKARRQQQKR KEHAKKVSPS QPLTSNRSVL EKAAPASMLL KGVVKPLDDI A
|
|---|
| |