Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2066 |
Symbol | |
ID | 6878057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2068441 |
End bp | 2070465 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642789935 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_002220487 |
Protein GI | 198284166 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.694295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCATT CGGGACATCA GGAACATGGG ATGGGTAACG CTCATCCCGG CGCGCACGGC GGTCACAACC ATGGTGCCAT GATCGCCGAT TTCCGGCGAC GGTTTTGGGT ATCGCTGGCC CTGACGATCC CTATCCTCCT TTTGTCGCCG CTTATCCAGC GGCTGCTGGG GCTGGAGGCG GCGCTCGCCT TCACAGGGTC ATCCTATGTG CTTTTCGCGT TGTCGAGTGG AGTGTATTTC TACGGCGGCT GGCCCTTCCT GAAGGGACTG TTTGCCGAGC TCGAGACCCG CAAGCCAGCC ATGATGACGC TGATCGCTCT GGCCATCAGC GTGGCCTATT TTTACTCGAG CGCCGTCGTG TTCGGGGTGC AGGGGGAAGT GTTCTTCTGG GAGCTCGCCA CGCTGATCGA TGTGATGCTG CTCGGCCACT GGATCGAGAT GAAATCAGTC CTGGGGGCTT CTGGTGCACT GGAAAAACTG GTGCAAATGA TGCCATCCGA GGCCCATCTC GTAACCCCGG AGGGCATGAA AGACGTGCCG GTCGCCAATC TGCAGCGCGG TGACCGGGTG TTGGTGAAGC CCGGCGAAAA AATCCCTACG GACGGACGTG TCATCGAGGG ACGGACCACC ATCAACCAGG CCATGCTCAC CGGCGAAAGC CAGCCCGTGG AGAAGGGGGA CGGCGACGAA GTGATCGGTG GTTCGGTTAA CGGGGAGTCG AGTATCACCG TCGAGGTCCA CAAGACCGGC AGTGAAACCT ATCTTTCACA GGTCATCGAG ATGGTGCGCC GGGCACAGGA GTCCCGCTCC CGGACCCAGG ACCTGGCCGA CCGCGCGGCC CTGGTGCTGA CCCTTACCGC GTTGAGCGTC GGCGGACTTA CCCTTGCCAT TTGGCTGGTC CTTGGCCAGC ACTTCGAGTT TGCCCTGGCC CGCATGGTCA CCGTTATGGT GATTGCCTGT CCCCATGCCC TAGGCCTGGC GATTCCGCTG GTCGTCGCCG TGTCCACCGC CCTGGCGGCA CAGCATGGGC TGCTTATCCG GGACCGGTCT GCTTTTGAAC GGGCGCGCCA ACTGCAGGCG GTGGTGTTCG ACAAGACCGG GACCTTGACG GAGGGACGGT TCGGCGTCAC GGATGTGGCC GTGCTGGGCG GATACGCCGA AGATGAGGTC GTGCGGCTCG CCGCAGCCCT CGAAAGTCAG TCGGAGCACC CCATCGCCGC CGGCATCGTG GCATATGCCA AAGCGAAGGG CATCGGCTTC GAGCCTCCCA AGGAATTCAA GGCCATCCCC GGCAAGGGTG CGCAAGCCGT TGTAAATGGG CGCAATGTGA AGGTCGTAAG CCCCGGCTAT CTCAAGGAGA GCGGTCTCGA TGTCAGCGAT GAGCGGATCG CGGCCTTGGC ATCCCAGGGC AAAACGGTGA TATACCTGCT CGTCGACGAG AAACCGGCGG GGGCTGTCGC GCTGGCCGAC ATCATTCGAG CGGAGTCGCG GGAAGCCCTC GCGCGGCTGA AGGGGATGGG CGTACAGGTG ATGATGTTGA CCGGCGACTC CGCAGCGGTG GCCCGTTGGG TGGCCCAGGA AATGGGGCTG GACGACTATT TCGCCGAAGT GCTCCCTGGA CAAAAGGCGG AGAAGATCAA GGAGGTAAAG GCGCGGGGAT TGCGCGTGGC CATGGTCGGC GACGGCGTCA ACGATGCGCC TGCCCTAGTG GAGGCGGATG TCGGGATCGC CATCGGGGCG GGCACGGACG TCGCCATCGA GTCGGCGGAC ATTGTGCTGG TCCGCTCCGA TCCCCGGGAT GTGGCGGCTA TCCTGGAACT TTCCCGGGCG ACCTATCGCA AGATGATCCA GAACCTGTGG TGGGGTGCCG GCTACAACAT CGTGGCGATC CCCCTTGCTG CCGGGGTGGC TTACAGCGTT GGCCTGGTGC TTTCCCCGGC GGTGGGGGCG GCCCTGATGT CCATTTCCAC CGTGATCGTC GCCATCAACG CCAAGCTCCT CCAGAGGGTT CGGCTCACCG CCTAG
|
Protein sequence | MDHSGHQEHG MGNAHPGAHG GHNHGAMIAD FRRRFWVSLA LTIPILLLSP LIQRLLGLEA ALAFTGSSYV LFALSSGVYF YGGWPFLKGL FAELETRKPA MMTLIALAIS VAYFYSSAVV FGVQGEVFFW ELATLIDVML LGHWIEMKSV LGASGALEKL VQMMPSEAHL VTPEGMKDVP VANLQRGDRV LVKPGEKIPT DGRVIEGRTT INQAMLTGES QPVEKGDGDE VIGGSVNGES SITVEVHKTG SETYLSQVIE MVRRAQESRS RTQDLADRAA LVLTLTALSV GGLTLAIWLV LGQHFEFALA RMVTVMVIAC PHALGLAIPL VVAVSTALAA QHGLLIRDRS AFERARQLQA VVFDKTGTLT EGRFGVTDVA VLGGYAEDEV VRLAAALESQ SEHPIAAGIV AYAKAKGIGF EPPKEFKAIP GKGAQAVVNG RNVKVVSPGY LKESGLDVSD ERIAALASQG KTVIYLLVDE KPAGAVALAD IIRAESREAL ARLKGMGVQV MMLTGDSAAV ARWVAQEMGL DDYFAEVLPG QKAEKIKEVK ARGLRVAMVG DGVNDAPALV EADVGIAIGA GTDVAIESAD IVLVRSDPRD VAAILELSRA TYRKMIQNLW WGAGYNIVAI PLAAGVAYSV GLVLSPAVGA ALMSISTVIV AINAKLLQRV RLTA
|
| |