| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1982 |
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| Symbol | |
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| ID | 6877970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1978341 |
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| End bp | 1979147 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642789851 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002220406 |
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| Protein GI | 198284085 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0844134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCAGTC TGGTGAAACA TCCTTCAGAT CATAGTCCAA AGTTTGGCCA AGACCAAAGT
GCCCCCCGCT TTGGGCTTGC CCGCATCCTC TCCAAAGCGG GGCTGTGCTC CCGGACCGTT
GCGGTGGAAT GGATTCGTGC CGGGCGGGTA GAGGTAGACG GTCGCCGGAT CCTCGATCCC
GAGGCACGCT TCCCCCTGTC CGGCCCCGGT ATCCGGATCG ATGGTCTCGA CATCACCGCC
AGCACCCGCC AGGTTTTGCT GTTACATAAA CCCCGCGGCG TTCTTACTAC TCGTCAGGAT
GAAAGAGGAC GTGCCACCGT ATACGACCTG CTGCCCGGGA GTCCATGGCT GGCCCCCGTC
GGACGCCTGG ATCAGGCCAG CTCCGGCCTG CTGCTTTTCA GCAACGATCC ACACTGGGCG
CAACGACTGC TGGATCCGGA TCAGCATGTG GCCAAGACCT ATCATGTGCA GATTCGCCCG
CCCCTCTCCA CCGACACCGT AGTCCAACTC GCGGCTGACT CCGTGCTCGA CGGCGAACCG
TGCTTACCGA TGCAGATCAG GGAGTTACGC TGCGGCGGCA AAACCCAATG GCTGGAGTTT
ATTTTGCAGG AAGGGCGCAA TCGCCAGATT CGGCGCCTCC TTGCCGCCTG TGATAGGGAA
GTGTTGCGAC TGATTCGCGT AGCGGTGGGA AATCTGCCTC TCGGCGAACT GCGGGCCGGT
GAATGGCGCT GGTTGCATAG TGGTGAGGAA GAGCTGCTAC GTCAGACGCC CACGCCCGGT
GATATCCCCT GCCTACCGTC AGAATGA
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| Protein sequence | MGSLVKHPSD HSPKFGQDQS APRFGLARIL SKAGLCSRTV AVEWIRAGRV EVDGRRILDP
EARFPLSGPG IRIDGLDITA STRQVLLLHK PRGVLTTRQD ERGRATVYDL LPGSPWLAPV
GRLDQASSGL LLFSNDPHWA QRLLDPDQHV AKTYHVQIRP PLSTDTVVQL AADSVLDGEP
CLPMQIRELR CGGKTQWLEF ILQEGRNRQI RRLLAACDRE VLRLIRVAVG NLPLGELRAG
EWRWLHSGEE ELLRQTPTPG DIPCLPSE
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