| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1980 |
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| Symbol | |
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| ID | 6877968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1976846 |
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| End bp | 1978003 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789849 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_002220404 |
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| Protein GI | 198284083 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.958254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCA CCCTGAAACC ACCGTCGTCG TATTCGCTCT ACGTGCATCT GCCTTGGTGC
AAGGCCAAGT GCCCCTATTG CGATTTCAAT TCCCATGCAG CCGACCGCAT CCCGGCAGAA
CGTTATCTGG ATGCATTGAT CGCCGATCTG GACCGCGAAC TGCCGCGCAT CTGGGGACGC
AGTGTGCGGA CTGTTTTTAT CGGTGGCGGC ACCCCCAGCC TCTTCCCGCC AGAAATCATC
GACCGCCTGA TCTCCACGAT CCGCGCCCGC CTGCGGCCGC ACTCCCGTAT GGAAATCACC
CTGGAGGCCA ATCCGGGAGC GATAGAGGCG GCCTATTTCC GCGCCTTCCG GGAGGTGGGC
ATCACCCGAC TCTCCTTAGG CATCCAGTCT TTCAACGACG ATTCTCTGCA ACGCCTCGGG
CGTATCCATG ATGCCGCCGC AGCCCACCGG GCCGTGGAAC TCGCCATCGC GGCTGAATTC
GAGAGCTATA ATCTCGATCT CATCTTTGCC CTGCCGGGGC AGGATCTCGC CGCAGCGCGG
GCCGATCTGC GCACGGCGTT GGAGTATGCA CCCCCTCATC TGTCCCTCTA TCAACTCACG
CTGGAAGCCG GAACCCCATT CTCGACCCAT CCACCCGCCG ATCTGCCGGA CAGCGACCAA
GCCGCCGACA TGGAAGATAT CCTGCGCCGG CAACTCCAGG AGGCCGGCAT GGAGCGCTAC
GAAATATCCG CCCATGCCCG GCCCGGTCAT CGCTGCCAGC ACAACCGCAA CTACTGGCTT
TATGGTGACT ATATCGGCAT CGGCGCCGGA GCGCACGGCA AAATCACCCT TCCCGAAGGC
ATCTGGCGCA GCCGCAAACC CAGCCGCCCC GAAAGTTATA TGGACGATGC GCTCAGTGTT
CTCGACATCC TCGGCGACCG GGAGCCGATT TTACCCGCCG ACAGGCCCTT CGAGTTCATG
CTCAACGCGT TGCGCCTGAC CGACGGCTTC CCGGTGGCGC TCTTCCCTGA ACGGACCGGC
CTGTCTTTGC AGATCATTCA ACCGCAGCTC CGCCAAGCCG AACGCGACGG GCTGGTGATC
ATGGAAGATG GCATCCTGCG ACCCACCGCG CTCGGGCTCA ACTTCTATAA TGACCTCTGC
GTGCGTTTCG TACCGTGA
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| Protein sequence | MNPTLKPPSS YSLYVHLPWC KAKCPYCDFN SHAADRIPAE RYLDALIADL DRELPRIWGR
SVRTVFIGGG TPSLFPPEII DRLISTIRAR LRPHSRMEIT LEANPGAIEA AYFRAFREVG
ITRLSLGIQS FNDDSLQRLG RIHDAAAAHR AVELAIAAEF ESYNLDLIFA LPGQDLAAAR
ADLRTALEYA PPHLSLYQLT LEAGTPFSTH PPADLPDSDQ AADMEDILRR QLQEAGMERY
EISAHARPGH RCQHNRNYWL YGDYIGIGAG AHGKITLPEG IWRSRKPSRP ESYMDDALSV
LDILGDREPI LPADRPFEFM LNALRLTDGF PVALFPERTG LSLQIIQPQL RQAERDGLVI
MEDGILRPTA LGLNFYNDLC VRFVP
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