Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1977 |
Symbol | |
ID | 6877965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1974875 |
End bp | 1975603 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789846 |
Product | ribonuclease PH |
Protein accession | YP_002220401 |
Protein GI | 198284080 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.87042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGTC CTAGCGGAAG AAATGCAGAC GCCTTGCGTC CGGTACAAGT TACCAGAAAT TTTACCAAGC ATGCTGAAGG TTCGGTGCTG ATAGCCTGCG GCGATACCAA GGTGCTATGC ACCGCCAGCG TCGAAGAAAA GGTACCGCCC TTCCTGCGCG GCGCGGGCAA GGGGTGGGTG ACGGCGGAAT ACAGTATGTT GCCCCGTGCC ACCCGGGAGC GGGTGGCACG GGAGTCCGCC AAAGGTCGTA TCGGCGGGCG CACCCATGAA ATCCAACGTC TTATCGGGCG CAGTCTGCGC GCCGCCGTGG ATCTGCAAGC TTTGGGCGAA CGCACTATCT GGGTGGATTG TGATGTGCTT CAGGCCGATG GCGGAACCCG TACCGCCAGC ATTACCGGCG CTTGTCTGGC GGTAGCCGAT GCCGTCCAGC ATCTGCGTAC TGTGGGACAG CTTCGGAATA ATCCTCTGCG GGACTGGGTG GCCGCCGTCT CGGTAGGTGT TTATCAGGGG CAGGCGGTGC TGGATCTCGA CTATGCCGAA GACAGCAATG CCGATGTGGA TATGAATGTG GTGATGACCG GCGCCGGCGC CTTTGTGGAA GTACAGGGAA CTGCGGAGGG CGCGGTGTTC AGTGCGGAAC AGATGGCTGA AATGCTGGCT CTGGCGCGCA AGGGGATCGC CGAATTGGTG GCCCGTCAGC ATCAGGAGTG TCCGGAAGCC CGTTCATGA
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Protein sequence | MIRPSGRNAD ALRPVQVTRN FTKHAEGSVL IACGDTKVLC TASVEEKVPP FLRGAGKGWV TAEYSMLPRA TRERVARESA KGRIGGRTHE IQRLIGRSLR AAVDLQALGE RTIWVDCDVL QADGGTRTAS ITGACLAVAD AVQHLRTVGQ LRNNPLRDWV AAVSVGVYQG QAVLDLDYAE DSNADVDMNV VMTGAGAFVE VQGTAEGAVF SAEQMAEMLA LARKGIAELV ARQHQECPEA RS
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