Gene Lferr_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1903 
Symbol 
ID6877888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1894386 
End bp1895177 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content56% 
IMG OID642789773 
Productbeta-lactamase domain protein 
Protein accessionYP_002220331 
Protein GI198284010 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGT TGCTCTATGA CAACGGAACG CATAAATGCA TAGCCTTCAC CGACCTGGTG 
GAAGGTGAGG GGATTCAGGC CAACCAGTTC CTCATCGTCA ACAATGGCGA AGGGATGCTG
CTCGACCCCG GCGGTAACCT CACGTACAAA AATCTGCTGG CGGAAATGGC GAGCTATTTC
CTGCCGGCGC ATCTCGATTA TGTATTTGCC TCTCATGAGG ATCCGGATAT CGTCGCTTCT
GCCAACGGCT GGCTGCTGAT CACCGACGCG AAGATTCTCA TCGCCAATGA ATGGACCCGT
TTTCTGCCGC ACTTCTGTTC CAAGGGGATG ACCGCAGGGC GGGTCATCGG TATTCCAGCG
CAGGGCATGA GGGTCAATCT GGCGGGGCAG GAACTCTTTG TCGTGCCCGC GCATTATATG
CATTCGGTGG GCAACTTCCA GGTTTACGAT CCGGTAAGCA AGATTCTGTT CTCCGGAGAT
CTGGGCGCCA ACCTGGTCAG TGGGCATGAT GCTGCCAAGG TAATTGAAGG TGCGGAAGCG
TTTGCGGCAC ATCGTGCGGC AACCTCCATG GATGGCTTCC ACCGCCGTTA TATGGGTGGC
CAGAAGGTCT GCAGGCTCTG GACCAATATG GCGCGGGGCA TGGACATCGA ATGGATCGTG
CCGCAACACG GCGCTTCCTT CAAGGGGCGG GAAACGGTCC TGGCTTTCCT CGACTGGTTC
GAGGGGCTGG AATCCGGACC TGATCTGTTG ACCCAGAAGG ATTTTCAATT TCCTATTCCC
GAGAATCTCT GA
 
Protein sequence
MSQLLYDNGT HKCIAFTDLV EGEGIQANQF LIVNNGEGML LDPGGNLTYK NLLAEMASYF 
LPAHLDYVFA SHEDPDIVAS ANGWLLITDA KILIANEWTR FLPHFCSKGM TAGRVIGIPA
QGMRVNLAGQ ELFVVPAHYM HSVGNFQVYD PVSKILFSGD LGANLVSGHD AAKVIEGAEA
FAAHRAATSM DGFHRRYMGG QKVCRLWTNM ARGMDIEWIV PQHGASFKGR ETVLAFLDWF
EGLESGPDLL TQKDFQFPIP ENL