Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1884 |
Symbol | |
ID | 6877869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1868340 |
End bp | 1871081 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642789754 |
Product | osmosensitive K+ channel signal transduction histidine kinase |
Protein accession | YP_002220312 |
Protein GI | 198283991 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0390049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.40253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACTG AAGATCGCAA AGATGGGCGA CCCGATCCGG ATGCCCTGTT GGCACAGGTG CAACAAGAGG AGCAGGCGCG TCAGCGCGGT CGCCTCAAGA TTTTTTTTGG CGCCGCTCCA GGCGTTGGGA AGACCTACGC CATGTTGCGC TACGGGCAGC AGGAGATGGC CAAGGGGGTG GACGTTTTGG TGGGCATCGT CGAAACCCAC CAGCGCAGTG AAACCCAAAC GTTGGCCGAT GCCCTGCCGA CGTTACCGCG AGTGCATCTT GCTTATAAAA ACGTTGTGCT TGAAGAGTTT GATCTGGATG CGGCCCTTGC CCGTCGTCCC GGACTGCTCC TGCTGGACGA ACTCGCCCAT AGCAACGCCC CCGGCTCTCG CCACAAGAAG CGCTGGCAGG ATCTGGAGGA ACTGCTGGAC GCGGGTCTTT CCGTGGCGAC CACCGTGAAT GTTCAGCACC TGGAGAGTGT CCACGAAGTC GTCCAGCAGA TTACCGGGAT ACAGGTTCAG GAGACCCTGC CGGATCAGAT CATTCAGCAG GCCGATGAAG TGATTCTGGT AGATATCAGT GACGAGGATC TTTTGCAACG GCTGAAGGAG GGTAAGGTGT ACCTGGGCGA TCGCGGTCAG CGCGCGATGA CCCATTTTTT CCGTAAAGGC AACCTCATCG CCCTGAGGCA ATTGGCATTG CGACTGGCAG CGGACCGGGT TGATCTGGAG TTGCGACAGT TTCATCAACA GAATCCGGAG GAGGGGCGAC GTAGCGGTAG CCGGGATCGT TTGCTGGTAG CCGTAAGTGG CCGCCCGGAA GATGAGCATC TGGTGCGCGC GGCATATCAC CTGGCGACCG CCCAACGGGC TGACTGGCTG GTGATTCATG TGGACACTCC ACGCGGCCTG CTGCAGAGAC CCCAGACCCA GGCATGGATA TGGAATCACC TGCATCTTGC GGAAAGTTTG GGTGCGGAAA CCGCACGTCT GACCGGAGTA AATATCGGCG CGGAGGTTTT GGCTTATGCG CGGCTGCGCG ACGTCACCCA GATTGTACTG GGACAGACCC AGGGCCTGCG CAAATTCCTT TGGTGGTGGC CCGGGTCTTT GACGGCCCAT CTGTTGAACA GCGAGCGCGG CATCGATGTG GTAATCCATC CATTACCGGT TAAAAAAGCC ATTCCCGAAG ATCGACGCCT GCGGAATCAA CAATACCTTG GCATTGTGGA CACGCCCCTG CGCCGCCGCA CTCGGAATCG CGCCTTTGTG ATCAGCGGAA CAATAGGTCT CGCCTTAAGC GGTCTGGCCT GGTCTCTGGG GGCTTACCTG GGTTTCGCCG GAGTGTTCAT GCTCTACATG CTGGGCGCGG TGGGCACCGC CCTGATGTAC GGCCGCTGGC CCTCCCTCAT CACGTTCATT GCCGCCGTGG TTAGCTACTA CTCGTTTGGG TTGGATCGCG GTCTGCCAAC CACGGTGGGC TCGCTTGCTT ACTTTGCACT GATCCTCTCT CTGATCCTGC TCATCAGCCA ACTGGTGGCG CGATCCCGCG AGCAGGAACT CATGGCCCGG ATCCGCGAGC GACGTGCCCG CAACCTCTAT CAACTGGTTC AGGCGCTCAG CAGTGCCCGT GGCGTCGAGG GGATTCTGAA CGCCAGTATC GAGAAGTTGC ACCAGACCCT GGGTATTGCG GTCGCATTCT GGCTGCCGCT GGTGGACAAC GCGGGTGGTC CTTTGCAGAT GTTTCCAGCG TCCACCGACC TGGAAGCTCC ACAACGCAAC CTGCGGGCTG CCGCCCGGTG GAGCTTTCTG AATAAAAAGA ACGCCGGGAT GAGCACCGAC ACGCTGGCGG ATATTCCGGC ACTGTTTATG CCCATGCTGT CCGGCGAGCG TGCGCTGGGG GTCATGATGC TGTCGGATCT CGACCTGCGT CGGGCTCCTG TCGACTGGTT GCGCTTTCTC GAAACAGTAG CGCGACTCAT CGCGGTGGCT CTGGATTCGG CGCAAGCTTC TCTTCAACGA ACGGAAGCCG ATGTCCGTTT GCGGGTCGAG CAATTACAAA ATGCGCTTTT GGGCGCCGTT TCCCATGACC TCCGGACGCC CCTGGCTGGT GTACTGGGCA CCGCGACGAC ACTCCAGCGC AATGCGCAGG GCTTGACGGC CGAGGAGCAT GATCTCCTGG AGAATATTCG TGAGCAAACC CAAAAGATGG AACACACCGT GGACCGCATT CTGCATATGG CCGCATTGCA GTCCGGGCGA CTCCATATCA AAAAAGAATG GGTTCCCCTG GAAGACCTGC TGGTCACCGC ACGCGATCAG GTTAAGGCCG TATGCGCTGA TCGTCCTTTT CAGGTGCGGA TCTCCAAAGA CCTGCCATTA CTTCTCGTGG ATCCGCAACT TATGGTGCAA GTGCTCACTA ACCTGCTGGA AAATGCTTGT AGATATAGCC CGAGTGGTCG CGCTATCGAG CTAGAAGCCT ATGCGAACGA TGCGGAAATT ACTGTTTGCG TCATTGACCA CGGCTTTGGC GTACCACCCG GCCGCGAAGA GGAGATATTT CTTCGCTTCA GCCAGGTCAA ACCGCCCCAT GGACTGGGTG GCAGCGGACT GGGCCTCGCC ATTTGTGCTG CTATCATAGA GTTGCATGGC GGACGTATCT GGGTGCGTAA CCGGGTTGCA GTGCGTGGTG CGGTTTTTTG TTTTACCGTT CCTCGGGAGC CTGAGCCGCC TATGCCGTCT GACGGAGATT AA
|
Protein sequence | MATEDRKDGR PDPDALLAQV QQEEQARQRG RLKIFFGAAP GVGKTYAMLR YGQQEMAKGV DVLVGIVETH QRSETQTLAD ALPTLPRVHL AYKNVVLEEF DLDAALARRP GLLLLDELAH SNAPGSRHKK RWQDLEELLD AGLSVATTVN VQHLESVHEV VQQITGIQVQ ETLPDQIIQQ ADEVILVDIS DEDLLQRLKE GKVYLGDRGQ RAMTHFFRKG NLIALRQLAL RLAADRVDLE LRQFHQQNPE EGRRSGSRDR LLVAVSGRPE DEHLVRAAYH LATAQRADWL VIHVDTPRGL LQRPQTQAWI WNHLHLAESL GAETARLTGV NIGAEVLAYA RLRDVTQIVL GQTQGLRKFL WWWPGSLTAH LLNSERGIDV VIHPLPVKKA IPEDRRLRNQ QYLGIVDTPL RRRTRNRAFV ISGTIGLALS GLAWSLGAYL GFAGVFMLYM LGAVGTALMY GRWPSLITFI AAVVSYYSFG LDRGLPTTVG SLAYFALILS LILLISQLVA RSREQELMAR IRERRARNLY QLVQALSSAR GVEGILNASI EKLHQTLGIA VAFWLPLVDN AGGPLQMFPA STDLEAPQRN LRAAARWSFL NKKNAGMSTD TLADIPALFM PMLSGERALG VMMLSDLDLR RAPVDWLRFL ETVARLIAVA LDSAQASLQR TEADVRLRVE QLQNALLGAV SHDLRTPLAG VLGTATTLQR NAQGLTAEEH DLLENIREQT QKMEHTVDRI LHMAALQSGR LHIKKEWVPL EDLLVTARDQ VKAVCADRPF QVRISKDLPL LLVDPQLMVQ VLTNLLENAC RYSPSGRAIE LEAYANDAEI TVCVIDHGFG VPPGREEEIF LRFSQVKPPH GLGGSGLGLA ICAAIIELHG GRIWVRNRVA VRGAVFCFTV PREPEPPMPS DGD
|
| |