Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1855 |
Symbol | |
ID | 6877839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1834386 |
End bp | 1835459 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642789724 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_002220283 |
Protein GI | 198283962 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCG CCGACCGTTT GCTGTTTCGG GGCATGCTGC TGTACAGCAG CCTCGTGCTG GCCATGCTGC TGACGCTGGT CTATATCGCC CAGATCATCG CCAAATCCTC CGGGCCCGGG CATGGCGTCT GGTCTATGAC CCGTCTGCTG TCCTATGCCG CTTTGCAGTT GCCAGACGTG GCGTACGATG TGATCCCGCT GGCGTTACTG CTTGGTGCCC TGGTCTGGAT GAGTATCCTG AGCGGGCATT CCGAGGTGAT TGCTCTGCGC ATGTCGGGGT GGTCGGTCTG GCGCCTGGAG CAGCCGTTGT TGCTGGTCGG ACTGTTGGGT GCCGGCCTGA TGTTTGCGCT GGGAGAATGG GTCATCCCGG TGACGGCGCC CGCCGCCGAG GCGATGTGGG CCAATGCCGG TGAACCGGGA GCGGGTTTCC ACAATATGGG ACCGCGGGGA TTATGGCTGC GCTATGGAAC ACAGATAATC CAGGTGGGCA CAGTGGGCGA TGGCGGGAAG ATCCTGCAGA ACCTGCACAT CGCCGACGTG CGCCAGGGTA TGGTGGGCAT CAATGCCATG ACGACGGCCG CTGAAGCCGT ATTCCAAGGG GGGCACTGGT ATCTCCACGA TGTCCGGCTG TTCAGGATCA CACCCGACCA GATACAGATG ACGGCCGTCA CGGAGACGCC CTGGCCGGTA GCCCTGCACC CGGCCACTCT AAGCAGTTTT GCACACCCGA CACGCACCAT GACCCTGCCC ACCCTGTGGC AAAGTTACCA GGCGTTGCAG AGCGGGGCGT TGAACATGAA TCGCTTTGCC CTCGCGTTCT GGCGTCGCGT GAGTTATCCG TGGGTGGGTC TGGTGATGAT TTTGCTCGCA GTACCGTTTG TGACGCGCAA CCCCCGGGGT GGGGGCCTGG CGGCGCGGGT CATGGCGGGG CTGGTGCTGG GACTGGGATT TCATTTCCTC ACGGAGATGT CGGGATATAT CAGTGTTTCC GGCGGGATAC CACCCCTAGC CGCCACGCTC CTGCCCATTG CGCTCTTTGC GGCCGTTGCC GGGGCGTTGC ATCGTTTTAG CTGA
|
Protein sequence | MKRADRLLFR GMLLYSSLVL AMLLTLVYIA QIIAKSSGPG HGVWSMTRLL SYAALQLPDV AYDVIPLALL LGALVWMSIL SGHSEVIALR MSGWSVWRLE QPLLLVGLLG AGLMFALGEW VIPVTAPAAE AMWANAGEPG AGFHNMGPRG LWLRYGTQII QVGTVGDGGK ILQNLHIADV RQGMVGINAM TTAAEAVFQG GHWYLHDVRL FRITPDQIQM TAVTETPWPV ALHPATLSSF AHPTRTMTLP TLWQSYQALQ SGALNMNRFA LAFWRRVSYP WVGLVMILLA VPFVTRNPRG GGLAARVMAG LVLGLGFHFL TEMSGYISVS GGIPPLAATL LPIALFAAVA GALHRFS
|
| |