| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1825 |
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| Symbol | |
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| ID | 6877809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1804056 |
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| End bp | 1805429 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642789694 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002220253 |
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| Protein GI | 198283932 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0793741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC GGCTAACTAA ATTCGTGAAA AACAGCATGC CAACACGTGA CGATCAAACA
TTATTTCGCC CAGATGCGAT CCAAAGCTCC GGGGCATCCT GGCTCGGTCC TATCCGCTTG
GGTTCGCCCG TCCATCATCA TGTCTACGCG GTCATAGCGC TATTCGTCAC GCTGGCGATC
ATCCTGCTCC TGATTTTCGG TCATTACACG AGACACCTGG CCGTCACCGG CATACTGGTC
CCGTCACAAG GCCTGTTAAC GATATCCGCC CCTATTTCCG GCACGGTTGA AAAAGTGTTG
GTGCATTCTG GCGAAAAGGT TCGCGCCGGT GCCCCATTGC TGGAAATCGC CAGCAACCCA
GATAATCCTT CCGTGGGATT AGTGGCGACC ATCATCGAAC AATCCATCAA TGCGGAAAAA
CGGGTTCTGA GCGGCAGCCT TTCCGCGGCG CGTTCTGTTT CCCGCATGCA GCAGACGGCC
TTGCGGGACA AACTGCAACT TCTGCAGGCC CAACTGGCGG AAACGAGCGC CGAGATTGCC
ATCCAGCATC AGGATATTAA CAGCACCGAG AAAGTGTTGC GGGAATTTAT GAGCGTGCGA
GGCAGGGGCC TCGTTTCGGA TCCCGAACTC CAGCAGCAGC ATCTCACGGT CTATAGTGCC
GAGACGCAAC TGGAAGGCCT TGAACGCCAG CGGACGGAAC TTGCGCAGAA CATCAGTAGC
GCGACCCATC AACTGGGGGA GTTGCCATTG ACGTCCTTGA ACCAGGAAAA CACCATCCGC
AGCAAACTGG AAACGCTTCG TCAGGAACTG GCCAAAACCG CCGGCAGCAA TGTTCTCCTC
ATACGCGCCC CCGCCAACGG CATTGTTTCC GCCATGACCG TCAACCCCGG CCAGGCCATC
GCCGCCGGGC AACCCGTCTT ATCCGTCATG CCGGCCGGGG ATCCCCTGCG CGCCCAGTTG
CTTGTGTCAA GCCAAGCCAT CGGCTTTCTG ACCGTAGGTG GGACGGTCGC ATTGCATTAC
GCGGCCTTCC CCTACCGGGA TTTTGGCACC TTCCATGGCA CCGTGCGTAG CATTTCTGGT
AGTGCACTAA CGCCTGCGGA GATTGCCGCC CTCACCGGTG CCCATTCCAC GGTCCCGCTC
TATCGGATCA TGGTCCAATT GCATCGTACC ACCGTGGAAG TCCATGGCCG CCAAAAATCG
CTACGTGCTG GCATGCAACT CCATGCAGAA ATCACCCTCA ATCGACTGCG CCTTATTCAA
TGGGTCTTTG AACCCCTGTA TGGTCTCGGT CACGATCTCT TTCCGAATTC GCGGCATGCG
GATCATTCCG CAGCAGCACC TTCACCGATC ATCGCCCAGC CATCCCTGCC ATGA
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| Protein sequence | MTNRLTKFVK NSMPTRDDQT LFRPDAIQSS GASWLGPIRL GSPVHHHVYA VIALFVTLAI
ILLLIFGHYT RHLAVTGILV PSQGLLTISA PISGTVEKVL VHSGEKVRAG APLLEIASNP
DNPSVGLVAT IIEQSINAEK RVLSGSLSAA RSVSRMQQTA LRDKLQLLQA QLAETSAEIA
IQHQDINSTE KVLREFMSVR GRGLVSDPEL QQQHLTVYSA ETQLEGLERQ RTELAQNISS
ATHQLGELPL TSLNQENTIR SKLETLRQEL AKTAGSNVLL IRAPANGIVS AMTVNPGQAI
AAGQPVLSVM PAGDPLRAQL LVSSQAIGFL TVGGTVALHY AAFPYRDFGT FHGTVRSISG
SALTPAEIAA LTGAHSTVPL YRIMVQLHRT TVEVHGRQKS LRAGMQLHAE ITLNRLRLIQ
WVFEPLYGLG HDLFPNSRHA DHSAAAPSPI IAQPSLP
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