| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1781 |
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| Symbol | |
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| ID | 6877763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1761351 |
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| End bp | 1762340 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642789649 |
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| Product | hopanoid-associated sugar epimerase |
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| Protein accession | YP_002220209 |
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| Protein GI | 198283888 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.889296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCC TGTTGACCGG GGCATCTGGT TTCGTCGGTG GCGCGGTGCT GCGCCGCCTG
CTCGCCGAAG GTCTGGAGAT ACGAGTGCTC CACCGCACCG GCGCTGATCC GGCCAACTGG
GAAGGGCTGG ACGTGGAGCT GGTGGTCGGG GATCTCACAG ACGGCCCGGC TCTGGACAGC
GCGGTGGCTG GCTGTCAGGC GGTTTTTCAT GTGGCTGCGG ACTACCGGCT CTGGGTGCCC
GATCCGCGCG CCATGTATGC CGCCAATGTG GGCGGCAGCG AACGTCTGGT GCGCGCGGCG
CTCGATGCCG GGGTGGAGCG CATCGTCTAT ACCAGCAGCG TTGCCGTGCT CGGTCACTAC
GCTGATGGCC GGGAAGCCGA TGAGGACACC ACCGCGCAAC TGGAAGACAT GATCGGGCAC
TACAAGCGCT CCAAATATCT CGCCGAGGAG GCTCTGCGGG CCCTTTGCCG GGAGGAAGGT
GCGCCCATCG TCATCGTCAA TCCGTCGACG CCCATAGGTC CGGCGGATCG CAAGCCCACC
CCCACCGGGC GGATGGTGCG CGATGCTGCG GCGGGCCGCA TGCCGGCGTA TGTCGATACC
GGTCTGAACG TGGTGCATGT GGATGATGTG GCCATGGGCC ATTGGCAGGC ATTTACGGAC
GGCGAGGTCG GGGAACGCTA TATTCTCGGT GGCGACAACC TCCCCTTGGC GGCGATCCTC
ACCCGTATTG CCGGTCTGAC CGGGCATCGT TCGCCGTGGC TGCGTATCCC CCGCCGCCTG
CTTTATCCCC TGGCCTGGGG GGCGGAGCGG GTGGTGCGCC TGCGGGGGAG GGGGACACCG
CTGGTAACGG TGGACGAGCT GCGCATGGCC GCCCACAAGA TGTATTTTTC GTCTGCCAAG
GCGGAGCGGG TCCTGCATTA TACCCATCGT CCTGCGGAGG AGGCCTTGCG GGACGCGGTA
CGATGGTTTG CGGAGCACCA CTATCTGTAG
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| Protein sequence | MKALLTGASG FVGGAVLRRL LAEGLEIRVL HRTGADPANW EGLDVELVVG DLTDGPALDS
AVAGCQAVFH VAADYRLWVP DPRAMYAANV GGSERLVRAA LDAGVERIVY TSSVAVLGHY
ADGREADEDT TAQLEDMIGH YKRSKYLAEE ALRALCREEG APIVIVNPST PIGPADRKPT
PTGRMVRDAA AGRMPAYVDT GLNVVHVDDV AMGHWQAFTD GEVGERYILG GDNLPLAAIL
TRIAGLTGHR SPWLRIPRRL LYPLAWGAER VVRLRGRGTP LVTVDELRMA AHKMYFSSAK
AERVLHYTHR PAEEALRDAV RWFAEHHYL
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