Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1742 |
Symbol | |
ID | 6877724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1719204 |
End bp | 1719845 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642789611 |
Product | dienelactone hydrolase |
Protein accession | YP_002220171 |
Protein GI | 198283850 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.716118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0129472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGGGT CAGAACGGTC CGTTCACATT TCGGCAGAAG GGTTGAGATT GGAAGGCAAC TGGGTGATTC CCGAAAACGC CCTCGGCCTG GTGCTCTTTG CTCACGGCAG CGGCAGCAGC CGCCTAAGTC CCAGGAATAA TTACGTGGCG CAGGTGCTGC GTGACGGCGG TATTGCTACC TTGCTCTTTG ATCTGCTGAC CGAAGAGGAG GATCGGGTAT ATGCCACCCG CTTCGATATC GGTCTGCTGA GCGAGCGCCT GGCTTTAGCT ACCCGCTGGA CACAGCGACA GCCGGAGGCA GCGGGCCTGC CCCTGGGTTA TTTCGGTGCC AGCACCGGCG CTGCGGCAGC CTTGCGCGCA GCCGCCCAAT TTGGTGACGC TATCGCTGCT GTGGTCTCCC GCGGCGGGAG GCCTGATCTG ACCGGACCGG CCATCTCCCG GGTGACGGCT CCTACCCTCC TGATCGTCGG TGGTCTCGAC GATGTGGTCA TCGGCATGAA TGAAACGGCC TACGCCGAGC TGCGGGCAGA GAAGCAGATG GTCATTGTTC CCGGCGCCAC CCATCTTTTT GAGGAGCCAG GCACCTTGGA AGAGGCCGCA AGCCTGGCCT TGGCGTGGTT TCAGCGCCAT TTCAAGAAGT AG
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Protein sequence | MVGSERSVHI SAEGLRLEGN WVIPENALGL VLFAHGSGSS RLSPRNNYVA QVLRDGGIAT LLFDLLTEEE DRVYATRFDI GLLSERLALA TRWTQRQPEA AGLPLGYFGA STGAAAALRA AAQFGDAIAA VVSRGGRPDL TGPAISRVTA PTLLIVGGLD DVVIGMNETA YAELRAEKQM VIVPGATHLF EEPGTLEEAA SLALAWFQRH FKK
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