| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1737 |
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| Symbol | |
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| ID | 6877719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1710151 |
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| End bp | 1711968 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642789606 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_002220166 |
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| Protein GI | 198283845 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000998332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000852075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCATAT TGCTTCTCCC CTTCATTTGG CTGGGCCGCG CTTTGCACTG GCTACGCATA
GGAATTCTCA ACCTGCTGAC GCTCGCCATT CTGTTGTTCC TTATCGCCTT TCTTGCCTAT
AAACTGTTCT ACCAGGTTGC CGTCCCCGAT GATGCTGCAT TGCTTGTCGC TCCCCAGGGC
TCCTTGTTTT ACAGCCGAAA CGAATCCTGG CAGACTCGTG CGCTCGATCA TCTTGACGGG
CGAAAACCTG CAGGTGTTTC CATTAGACAG ATGGTTCAAG CCATTGATCG TGCCTCCACG
GACGCGCGTA TCCACCTGCT GGAATTGAAT TTAAGTGACT TTGGTGGGGG GAGTATCACC
CAGCTAGACA CCGTAGCACG GGCTCTTCAG CGTTTTCGCG CTCATGGTAA ACCCATTTAT
GCCTATGCGC CCGACTATTC CCAGGATGCT TATTTACTGG CCGCCCAGGC CAACCATATT
TACATGCCCA GGCTGGGTAC GGTCCTGATC ACAGGATTTT CGACGCGTGG TTTATACTTC
AAAGGATTGC TGGACAAGTT GGGAATCACG GTGTATTCCT TTCGGCAAGG TAAATATAAA
TCCGCCATGG AGCCTCTTAC CCTGACGCAT ATGTCCAAGT CTGCGCAGGT AGAAAATGCC
GCCTGGCTGA AGGTGTGGTG GGATACTTAT CTGCAAGATG TCGCCAAGGG TCGTGGGCTG
AAGGCCACAC TGGTCAGCCG TTATGCAGAT CAGTTGCCTG AACTCTTAGA AAATTATCAA
GGAAATGCTG CGGAACTTGC CCTGAAGCAA GGGCTGATCA CTCGTATCGG CGATGAGCAC
GCTTTCAGAC AGGCGGTTGC CGCCGCACTC AAACAACCTC CTAAACACAT CAAAAAGATT
GGGTTGCATG CCTATCTGGC GGCAACCAAA CCATCCACAA CCGCCAGCGC CAAAATCGCG
GTCGTACCCA TTGACGGAAT GCTCGTAACC GGAGATGCCC CCCTCCCAGG AGTAGTCGCT
GCCCAAGCCA CGATCAAACA GTTGGATCGC GTAGGTCATG AAGCCTCCGT CAAGGCAGTG
GTTTTGCAGG TCAATAGTCC GGGTGGCGAT GTAAACGCTG CCCAAGCGAT TCGTGCAGCT
ATTTTACGCA TACGCAAGGC GCACAAACCG GTTATCGTCA GCATGGGCAC CTTAGGTGCC
TCGGGTGCTT ACTGGCTCTC AACTGCAGCA GATCGTATCT ATGCACACCC CACCACGCTG
ACTGCCGATA TTGGTGTGTT CGCACTATTT CCGAATTATG CGGGGCTGCT AAAAAAACTG
GGCATTCACT ATTCCGGGAT AGCCACTACG AGGAATGCCA ACGCCATGTC CCCATTTTCA
CCCCTGGGTA AAAACGTTCA AAAAGCACTT CAGGCCATGG TAGACAATAC ATACGCTGAC
TTCGTAAACC TGGTGGCCAA TGCCAGACAT ATCCCAACAA ATAAAGTTGA ACACGATGCC
CAGGGTCGCG CCTGGAGTGG CCTGGACGCC TATCACCTTG GGTTGGTCAA TGCACTCGGG
GGCATGCCGC AAGCCATTCA GGAGGCCGCC AAACTGGCAA AACTTTCTAA GGGCAAATAT
CAGGTACAAT ACCTGCCTCC ACCAACTCCA TCGAATAACA TCCCACAATG GTTGAACATG
TGGAGTCTGG CAAGACTGCG TGACGTTATA TTGGGGGAAA ATTCCGCGCT CCATGGAGTG
ATTCCCATGG AACAGATTCG TTTACTGATT CATGAAGCAC ACCCATACGC CCTTATGGCT
TATTTACCCG TAAAATGA
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| Protein sequence | MRILLLPFIW LGRALHWLRI GILNLLTLAI LLFLIAFLAY KLFYQVAVPD DAALLVAPQG
SLFYSRNESW QTRALDHLDG RKPAGVSIRQ MVQAIDRAST DARIHLLELN LSDFGGGSIT
QLDTVARALQ RFRAHGKPIY AYAPDYSQDA YLLAAQANHI YMPRLGTVLI TGFSTRGLYF
KGLLDKLGIT VYSFRQGKYK SAMEPLTLTH MSKSAQVENA AWLKVWWDTY LQDVAKGRGL
KATLVSRYAD QLPELLENYQ GNAAELALKQ GLITRIGDEH AFRQAVAAAL KQPPKHIKKI
GLHAYLAATK PSTTASAKIA VVPIDGMLVT GDAPLPGVVA AQATIKQLDR VGHEASVKAV
VLQVNSPGGD VNAAQAIRAA ILRIRKAHKP VIVSMGTLGA SGAYWLSTAA DRIYAHPTTL
TADIGVFALF PNYAGLLKKL GIHYSGIATT RNANAMSPFS PLGKNVQKAL QAMVDNTYAD
FVNLVANARH IPTNKVEHDA QGRAWSGLDA YHLGLVNALG GMPQAIQEAA KLAKLSKGKY
QVQYLPPPTP SNNIPQWLNM WSLARLRDVI LGENSALHGV IPMEQIRLLI HEAHPYALMA
YLPVK
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