Gene Lferr_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1725 
Symbol 
ID6877707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1698189 
End bp1699073 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content61% 
IMG OID642789594 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_002220154 
Protein GI198283833 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0935849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0205477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGT TCGATCGGGT ACTGCCACCC AAAATCAAAA AAACCTCGGC AGAGGCCTCC 
GTTGTGAGCG AGAACAAGCG CACCGTACCT GAGGGCTTGT GGTCCAAGTG CCCCACCTGT
CAGGTGGTGC TCTACCGTAC GGAGCTGGAG GAAAATCTTT ACGTTTGCCC CCACTGCGGA
CATCATCAAC GGATCAGCGC CCGGCAGCGT CTGGATTTCT TCCTCGATGC AGAACCCCGG
CTGGAGATTG CCAAGGAATA CGTTCCGGTG GATCCCCTGC GCTTCAAGGA TCAGAAGCGC
TATAAGGACC GCCTGCAGGA AGCCCAGGCC AAGTCCGGAG AGAAAGACGC CCTGGTGGTG
ATGCGCGGCC TCCTGGAAGG GCACCCGGTG GTGGTTGCCG CTTTTGCCTT CGAGTTCATG
GGCGGGAGCA TGGGATCGGT GGTGGGAGCC CGTTTTGCCC GTGCGGCGGA AACGGCGCTG
ACCGAGCGCT GTCCACTGGT CTGCTTTAGT GCCAGTGGCG GGGCACGGAT GCAGGAGGGA
CTATTTTCCC TGATGCAGAT GGCCAAGACT TCTGCCGCCG TGGAGCGGCT GGCCAAGGCA
GGGGTGCCCT TCATCTCGGT GCTCACCGAT CCGACCATGG GCGGTGTCTC CGCCAGTCTG
GCCACCCTGG GAGATATTCT GATTGCGGAG CCCAAGGCCC TGATTGGATT TGCCGGTCCG
CGGGTGATCG AGCAGACCAT CCGTGAAAAG CTGCCGGAGG GTTTTCAACG CGCGGAATAT
TTGCTGGAGC ACGGCGCCAT CGATCAGATT GTCGATCGCC GCCAGATGCG CGCGGTGGTG
AGCGAGATGC TGGGGATGCT GACCCATGCC CCGAGTCCGC ATTAA
 
Protein sequence
MSWFDRVLPP KIKKTSAEAS VVSENKRTVP EGLWSKCPTC QVVLYRTELE ENLYVCPHCG 
HHQRISARQR LDFFLDAEPR LEIAKEYVPV DPLRFKDQKR YKDRLQEAQA KSGEKDALVV
MRGLLEGHPV VVAAFAFEFM GGSMGSVVGA RFARAAETAL TERCPLVCFS ASGGARMQEG
LFSLMQMAKT SAAVERLAKA GVPFISVLTD PTMGGVSASL ATLGDILIAE PKALIGFAGP
RVIEQTIREK LPEGFQRAEY LLEHGAIDQI VDRRQMRAVV SEMLGMLTHA PSPH