Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1689 |
Symbol | |
ID | 6877670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1652335 |
End bp | 1653255 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789557 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_002220118 |
Protein GI | 198283797 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAATA AGGACATCGG AATGGTGGGC TTGGGCCGGA TGGGTGCCAA CATGGCACGG CGTCTGCACC TCAAGGGTAT GAAGGTCATC GCTTACAACC GTCATACCGA AAAAGCCACG GAGCTGGCCA AAGAAACCGG AATGCACGCC GCCAGCAGTC TGGAAGCTCT CGTTCAGGCG TTGCCTACCC CCCGGGTCCT CTGGCTCATG CTTCCCGCCG GAGAGGCCAC CCAGAGCCAC ATCGATTCCA TTCTTCCCTT GTTGAGCAGA AATGACATAC TGATCAACGG TGCCAATGCC TTTTACGAGG ACTCCATCGC CCAATCCCAA AAAGTGGAGG CGGTAGGGGT ACATTACATA GACGCCGGTG TTTCCGGCGG TATCTGGGGT CTGCGGGAGG GTTATGCCCT GATGGTCGGC GGCAGCCCGG AAGCCGTAGC CGAGGTAACG CCTTTTCTGG AGGCACTGGC GCCGGCCGTC GACAAAGGCT GGTTGCACTG TGGCCCCGTC GGCAGCGGTC ACTTCGTCAA AATGGTCCAC AATGGTATCG AATACGGCAT GATGCAGGCC CTTGCCGAAG GCTTCGCCAT TTTGCAGGGC AAAACCGAAT TCGGGCTGGA CCTCGCCAAG GTCGCCGAAA TGTGGCGCTA CGGCAGCGTC GTCCGCTCCT GGCTCCTCGA CCTCACCGCC GATACCCTCG CCAAAGATCA GGTGCTCGCC GATATCGCGC CGATAGTGGC GGACTCCGGC GAAGGCCTGT GGACCGCGCA GACGGCCCTC GCACTGAAAA TCCCCGCGCC GGTCATCACC CTCGCCCTGC AGATGCGCTG GGCTTCCCAG GGGCGCGACG ACTACGCCGC CAAACTCCTG GCGATGATGC GTAACGAGTT CGGTGGTCAC GCCGTGCAAA AGGAGGCCTG A
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Protein sequence | MGNKDIGMVG LGRMGANMAR RLHLKGMKVI AYNRHTEKAT ELAKETGMHA ASSLEALVQA LPTPRVLWLM LPAGEATQSH IDSILPLLSR NDILINGANA FYEDSIAQSQ KVEAVGVHYI DAGVSGGIWG LREGYALMVG GSPEAVAEVT PFLEALAPAV DKGWLHCGPV GSGHFVKMVH NGIEYGMMQA LAEGFAILQG KTEFGLDLAK VAEMWRYGSV VRSWLLDLTA DTLAKDQVLA DIAPIVADSG EGLWTAQTAL ALKIPAPVIT LALQMRWASQ GRDDYAAKLL AMMRNEFGGH AVQKEA
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