| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1679 |
|---|
| Symbol | |
|---|
| ID | 6877659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1642286 |
|---|
| End bp | 1642759 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642789546 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_002220108 |
|---|
| Protein GI | 198283787 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACG CAGCGCCAAG ACCCCTCATC CCTCCAGTGG GAGAGGGCAA ACGCGGGGAA
AATGGTTATC TGGGCTACCT GCTGCGGCAG GCTGCGGGGG CGTACCGGCA CCGAGTGGAA
CGGGCGCTCG CCGACCTGCG TGTAACGCCT CCACAATTTT CCGTGCTCAC CATGCTGGCC
GCCTATCCCG GCATTTCCAA TGCCGATCTG GCGCGGCTGG CTCTCCTCAC CCCGCAAACG
GTCAGCACCA TTGTCGCCAA CCTGGAGCGC GCCGGGGCCA TCGTGCGCCA GCCGCATCAA
TACCATGGCC GTATCCAGCA GATTGATCTC AGCGAGACAG GCAAGTCGTT ATTGGCGGCC
TGCCGTGAGC GGGTGCAGGG TATTGAGCGC CATCTGGCTG ATGGGCTTTC CCGTGAAGAG
GAATCGGCAC TTCGAAAATG GCTGGTTCGC GTTGCCACGT CAGCTCCACG GTAG
|
|---|
| Protein sequence | MDDAAPRPLI PPVGEGKRGE NGYLGYLLRQ AAGAYRHRVE RALADLRVTP PQFSVLTMLA
AYPGISNADL ARLALLTPQT VSTIVANLER AGAIVRQPHQ YHGRIQQIDL SETGKSLLAA
CRERVQGIER HLADGLSREE ESALRKWLVR VATSAPR
|
|---|
| |