Gene Lferr_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1673 
Symbol 
ID6877653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1638654 
End bp1639313 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID642789540 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_002220102 
Protein GI198283781 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.883741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATTGTC CTAAGTCATT TGCAGAAAAC CGCCCGGAAA TCCTGCGGGC ACTGATTCAG 
TGTTATCCCC TCGCAACATT GGTCAGCATG GGCGGTAATG GTCTGGAGGC GAATCATATT
CCCTTGTACC TCGTACCTGG TGAAGGACCG CAACCGGTGC TGCAAGGCCA TGTGGCACGC
GCCAATCCCC TGTGGCGAGA GGCGCCCCCG GACGATGAGG TGCTGGTCAT CTTTCAGGGG
CCGCAACACT ACATCAGCCC TTCCTGGTAT GCGACCAAGG CGGAAACCGG CGAGGTGGTG
CCTACTTGGA ACTATGCCGT CGTCCATGCC CACGGGCCGC TGCAGGTCAG GGACGATCCC
TATTGGGTAC GGCAACAGAT GGTCGCCCTG ACCGCGCAGC AGGAGAACAG TTTCACCCCG
CCCTGGGAGG TGGGTGATGC GCCTCGGGAT TTTACGGATC GTCTCATCCA GCAGGTAGTG
GGCATAGAAA TCCCCATCTC CCGCTGGGTG GGCAAGTGGA AGGTCAGCCA GAACCAGCCG
GTTGGCAACC GTGACAGTGT CGTCGCGCAC CTGGAGCAGC AAAACCAAGC TGGCTCTGAG
GCCATGGCTG AATATATTCT GGCCAGCCTG AAAGGCGGCA AGAAGGACCA TCCCGGATGA
 
Protein sequence
MYCPKSFAEN RPEILRALIQ CYPLATLVSM GGNGLEANHI PLYLVPGEGP QPVLQGHVAR 
ANPLWREAPP DDEVLVIFQG PQHYISPSWY ATKAETGEVV PTWNYAVVHA HGPLQVRDDP
YWVRQQMVAL TAQQENSFTP PWEVGDAPRD FTDRLIQQVV GIEIPISRWV GKWKVSQNQP
VGNRDSVVAH LEQQNQAGSE AMAEYILASL KGGKKDHPG