Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1673 |
Symbol | |
ID | 6877653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1638654 |
End bp | 1639313 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642789540 |
Product | FMN-binding negative transcriptional regulator |
Protein accession | YP_002220102 |
Protein GI | 198283781 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.883741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATTGTC CTAAGTCATT TGCAGAAAAC CGCCCGGAAA TCCTGCGGGC ACTGATTCAG TGTTATCCCC TCGCAACATT GGTCAGCATG GGCGGTAATG GTCTGGAGGC GAATCATATT CCCTTGTACC TCGTACCTGG TGAAGGACCG CAACCGGTGC TGCAAGGCCA TGTGGCACGC GCCAATCCCC TGTGGCGAGA GGCGCCCCCG GACGATGAGG TGCTGGTCAT CTTTCAGGGG CCGCAACACT ACATCAGCCC TTCCTGGTAT GCGACCAAGG CGGAAACCGG CGAGGTGGTG CCTACTTGGA ACTATGCCGT CGTCCATGCC CACGGGCCGC TGCAGGTCAG GGACGATCCC TATTGGGTAC GGCAACAGAT GGTCGCCCTG ACCGCGCAGC AGGAGAACAG TTTCACCCCG CCCTGGGAGG TGGGTGATGC GCCTCGGGAT TTTACGGATC GTCTCATCCA GCAGGTAGTG GGCATAGAAA TCCCCATCTC CCGCTGGGTG GGCAAGTGGA AGGTCAGCCA GAACCAGCCG GTTGGCAACC GTGACAGTGT CGTCGCGCAC CTGGAGCAGC AAAACCAAGC TGGCTCTGAG GCCATGGCTG AATATATTCT GGCCAGCCTG AAAGGCGGCA AGAAGGACCA TCCCGGATGA
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Protein sequence | MYCPKSFAEN RPEILRALIQ CYPLATLVSM GGNGLEANHI PLYLVPGEGP QPVLQGHVAR ANPLWREAPP DDEVLVIFQG PQHYISPSWY ATKAETGEVV PTWNYAVVHA HGPLQVRDDP YWVRQQMVAL TAQQENSFTP PWEVGDAPRD FTDRLIQQVV GIEIPISRWV GKWKVSQNQP VGNRDSVVAH LEQQNQAGSE AMAEYILASL KGGKKDHPG
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