| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1645 |
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| Symbol | |
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| ID | 6877625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1615127 |
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| End bp | 1616338 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642789512 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002220074 |
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| Protein GI | 198283753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.849012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000565509 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTCTGC AAAAGATCGG GAATCTCCCC AGCGCGGCCA CCGACGTCAC CCGCTTTGAG
GTTTTGGGCG CTATCAGCGT GTCACATTTT CTCAATGATA GCATCCAGTC GCTGATGCTG
GCGGTGTACC CGCTATTCAA AAGCCATTTC GACCTGAGTT TTGGGCAGAT CGGGTTGATT
ACGCTCGCCT ATCAGGTGAC CGCATCCATC GTTCAACCGT TGGTCGGGCG TTTTACCGAT
GGCCACCCCA TGCCCTATTC ATTGCCCTTC GGCATGCTGT TTACGTTTGG TGGGCTGCTG
TTGCTATCCG TGGCTCCAAA TTATGAGGTG CTCTTGTTGG CAGCAGCGTT AGTGGGCCTG
GGTTCTTCAG TATTCCACCC AGAGTCGTCG CGGGTGGCGC GGATGGCCTC TGGCGGGCGC
CACGGACTGG CGCAATCCAT CTTTCAGGTG GGTGGAAATG TGGGTACCGC AGCGGGCCCG
TTGCTGGCCG CCTTTGTCGT CATGCCCAAC GGTCAGCACA GCCTGTCATG GTTCTCGCTC
GCGGCGTTGC TAGCCATTGT GATTCTTTCT TTCGTGGGGC GCTGGTATCA GCACCAGCAC
CGTCAGCCCA GAAGGCCAGT GGCAAAGGCC GTGGCGCCCT TGCTACCTGC CAAACTGGTG
CGACGCAGCA TGATCATACT GGTCGCACTG ATGTTCTCCA AGTTTCTGTA TCTGACCAGC
ATCAGCAGTT ACCTGATTTT TTACCTGATG CAGCGCTTTC ATATCGGAAC CCGGGAAGCG
CAGATGCATC TCTTCGTATT TCTGGCGGCA GTGGCAGCGG GGACATTGGC GGGCGGGCCG
ATTGGTGACC GGATCGGTCG CAAGAAAGTG ATCTGGGTCT CCCTGCTGGG GATCGCGCCC
TTCACCATGG CTCTACCTTA CGTGGGCCTG ACCCTGAGTG CCATGTTGAC CATGGTCATC
GGTTTTCTGC TGGCTTCGGC CTTTCCGGCC ATTGTGGTGT ATGCGCAGGA ATTGGTACCC
GGCAAGATCG GGACCGTTTC CGGTCTGTTT TTCGGGCTGG CTTTTGGTCT GGGCGGGGTC
GGTGCCGCAT TGCTGGGGGA ACTGGCAGAC GTCTGGAGTA TCCAGGTGGT ATATCAGATA
TGCGCTTTCC TGCCTTTGCT CGGTATACTG GCCGGATTTC TGCCCCATAT CCCCAGTGTG
CGAAAGCGTT AG
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| Protein sequence | MSLQKIGNLP SAATDVTRFE VLGAISVSHF LNDSIQSLML AVYPLFKSHF DLSFGQIGLI
TLAYQVTASI VQPLVGRFTD GHPMPYSLPF GMLFTFGGLL LLSVAPNYEV LLLAAALVGL
GSSVFHPESS RVARMASGGR HGLAQSIFQV GGNVGTAAGP LLAAFVVMPN GQHSLSWFSL
AALLAIVILS FVGRWYQHQH RQPRRPVAKA VAPLLPAKLV RRSMIILVAL MFSKFLYLTS
ISSYLIFYLM QRFHIGTREA QMHLFVFLAA VAAGTLAGGP IGDRIGRKKV IWVSLLGIAP
FTMALPYVGL TLSAMLTMVI GFLLASAFPA IVVYAQELVP GKIGTVSGLF FGLAFGLGGV
GAALLGELAD VWSIQVVYQI CAFLPLLGIL AGFLPHIPSV RKR
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