| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1603 |
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| Symbol | |
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| ID | 6877581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1563714 |
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| End bp | 1564481 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642789468 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_002220032 |
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| Protein GI | 198283711 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0684116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGCCCG ATCAGCAAAT GGCTGCGTAT ATTGCCCATG AACACAAGGC CAACGCTTCT
GCTTCTGGCT TCAGGCCGAC ATCCGCCAAC AGCGATAAAG CCAAAGCCGG TATCTACACG
TCTCTCGGGA CCGCTTATTT GCAGGATGGC CATCCTCGAC AGGCGATCCG GGAACTGCAA
TTGGCGATTG CCGCTAACAG CCGTTATGCC GATGCGTACA ATGTCATGGG TCTGGCCTAC
GAACAGTTGC AGCAGCGTGA TCTGGCCCGC AACGCCTTTC GCCGGGCGCT CTCCTTAGAT
GCAAAAAACC CAGAATACCT CAATAATTAC GGCGCATTCC TCATCAACTC CCGTAACTAT
GGCGAGGCGG TTATCGAGCT GAAACGGGCC ACGTCCGATC CGCTATACAG CACGCCGCAG
TTCGCGTGGA CCAATCTCGC ACAGGCCTAC GCAGGACTCA AGGACTTGTC GGCGGCACGC
GATGCCCTGG ACCGGGCACT TTATCTGGTA CCGAACTATC CGCCAGCCCT GCTGATGCTT
GCCGAACTGG ATTACAATGA CGGCAAAGCA GATGCCGCTT TCGCCCATTT GCAGGTGGTT
CTGGCGCAGG AGCCGGATAA CGCTGACGCG CTCTTGCTGG CGGGGCGGAT TGCCGCCCTG
CAGGGGCGGA CAACACAGGC ACAGTCCCTT TGGCAGCGCT GTGTGACTGC TTCACCTTAT
TCCGCAGCAG GCAAGCAGGC GCAGCGACTG CTGCTGCGAA ACGGTTGA
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| Protein sequence | MTPDQQMAAY IAHEHKANAS ASGFRPTSAN SDKAKAGIYT SLGTAYLQDG HPRQAIRELQ
LAIAANSRYA DAYNVMGLAY EQLQQRDLAR NAFRRALSLD AKNPEYLNNY GAFLINSRNY
GEAVIELKRA TSDPLYSTPQ FAWTNLAQAY AGLKDLSAAR DALDRALYLV PNYPPALLML
AELDYNDGKA DAAFAHLQVV LAQEPDNADA LLLAGRIAAL QGRTTQAQSL WQRCVTASPY
SAAGKQAQRL LLRNG
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