Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1594 |
Symbol | |
ID | 6877572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1554881 |
End bp | 1556098 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789459 |
Product | Rh family protein/ammonium transporter |
Protein accession | YP_002220023 |
Protein GI | 198283702 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.204728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0779925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACCCA CAGGAGTCAC GCCTCCAGGC GGAAATGTGT TTTTTTTGCT GATGGGCGCC ATTCTGGTGT TTGCCATGCA TGGCGGATTC GCCTTCCTGG AACTGGGTAC GGTACGACGG CGCAGCCAGG TAAATGCGCT GGTGAAGATT CTCAGTGATT TTGGTATATC CACCATCGTC TATTTTTTTG TGGGTTATCA TATCGCCTAT GGCATCAGCT TTTTTGCCGA TGTAAAGGCT CTGACCGCAA GCAATCATGG TTTTCAGATG GTGCGGTTTT TTTTCCTGCT GACCTTCGCT GCTGCGGTGC CAGCCATTAT CTCCGGTGGT ATTGCCGAAC GGGCACGTTT TTATCCCCAA TTGCTGGCGA CTGCCTTTCT GGTGGGACTG GTTTATCCCT TTTACGAAGG GATCGTCTGG AATGGTCATT ATGGTATTCA AGCCTGGTTT ACCAGCGTTT TTGGTGCACC TTTCCACGAT TTCGCAGGCT CGGTGGTAGT GCATGCCATG GGTGGATGGA TGGCGCTGAT GGCGGTCTGG CTGCTGGGTT CGCGCAAGGG GCGTTACGGG AAAGATGGTG CGGTACACGC CATGCCGCCT TCCAACATTC CCTTTCTGGC GCTGGGCTCC TGGATTCTGA TCATCGGCTG GTTTGGTTTT AATGTGATGA GTGCACAGCA AATTGCCGCT GTGCAGGGTC TGGTGGCACT CAATTCGCTT ATGGCACTGG TGGGCGGCAT GCTGGCGGCG CTGGCGGTAG GGAAGGGCGA TCCGGGCTTC GTTCATAATG GCGCTCTGGC AGGTCTCGTG GCCATCTGCG CCGGTTCCGA TGTGGTGCAA CCCATTGGGG CTTTGGCCAT CGGTGCCATT GCCGGCATTA TTTTTGTCTA CCTGTTCACC TTTGTGCAGC ATCGCCTGCG TCTGGATGAC GTGCTGGGTG TCTGGCCGCT CCATGGTGTT TGCGGGGTGT GGGGTGGACT GGCCGTCGGA ATTTTTGGAC ATCAGTTCCT CGGCGGCGCC GGTGGGGTCA GTTTCTGGTC TCAGTTGCTG GGCACCGCAC TAGGCGTCCT GGTCGCCCTG GCGGGCAGTG GTATCGTCTA CGGCAGCATC AAGTACTTTA TCGGGATTCG TCTGGATCCC GAGGCGGAGT ATGCGGGGGC GGATTTGAGC TTGCACCATG TCAGCGCGTA TCCTGAAGAG GATATCGAGA GGGCGTGA
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Protein sequence | MIPTGVTPPG GNVFFLLMGA ILVFAMHGGF AFLELGTVRR RSQVNALVKI LSDFGISTIV YFFVGYHIAY GISFFADVKA LTASNHGFQM VRFFFLLTFA AAVPAIISGG IAERARFYPQ LLATAFLVGL VYPFYEGIVW NGHYGIQAWF TSVFGAPFHD FAGSVVVHAM GGWMALMAVW LLGSRKGRYG KDGAVHAMPP SNIPFLALGS WILIIGWFGF NVMSAQQIAA VQGLVALNSL MALVGGMLAA LAVGKGDPGF VHNGALAGLV AICAGSDVVQ PIGALAIGAI AGIIFVYLFT FVQHRLRLDD VLGVWPLHGV CGVWGGLAVG IFGHQFLGGA GGVSFWSQLL GTALGVLVAL AGSGIVYGSI KYFIGIRLDP EAEYAGADLS LHHVSAYPEE DIERA
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