Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1529 |
Symbol | |
ID | 6877504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1486256 |
End bp | 1486900 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642789392 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002219958 |
Protein GI | 198283637 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.322486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0695414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGACA ATAAATCACC GGTTTTCATG GTGTTAGTGC CCGTATTTAA CCGTATGAAC CTATTGGAAA GGGCTATTGG TTCTCTCTAT CGGCAGACTT TTCAGGATTT CTGTTTGGTG GTGATAGATG ATGGCAGCAC CGATAACAGT CTGCAACGCG CGATGGATCT CACCAAAAAA ATGATACATC CATCGGGTTT GATCCGGCTG CCTGAAAATG TCGGTGTTGG AACTGCGCTG AATATCGGGG CGGAGGTGGG CCGCAGTAAA AGCATTCCTT GGATAACGCG GCTGGACTCC GATGACGTGT ATGCATCGGA TTATCTGGAA AACCGGCTAC GGGTGATCCG TACGTATCCG GAGGTGGATT TGTTCCATGG TGGAATCCGG GTCATCAATG GCCCTGAGAC GGTTCCTGAC GCAAGAAATA AGAAACGGCG CATTGCCATA TCAGAAACCT CCCAAGGGGC GACTATAGTG GTTAAGTCTG AAGTTTTTAA GCGATTGGGG TGCTTTGATG ACCTGCGCTA CGGGGAAGAT TATGCCTTTC TGGAAAAAGC CCGTATGGCA GGATGCTCAA TCCGTAAGTT GGATTTCGGA GACTATTATT ATTACCGAGA TACGCTGAAT GCACTAACCT GTTAG
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Protein sequence | MLDNKSPVFM VLVPVFNRMN LLERAIGSLY RQTFQDFCLV VIDDGSTDNS LQRAMDLTKK MIHPSGLIRL PENVGVGTAL NIGAEVGRSK SIPWITRLDS DDVYASDYLE NRLRVIRTYP EVDLFHGGIR VINGPETVPD ARNKKRRIAI SETSQGATIV VKSEVFKRLG CFDDLRYGED YAFLEKARMA GCSIRKLDFG DYYYYRDTLN ALTC
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