Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1441 |
Symbol | |
ID | 6877415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1397756 |
End bp | 1398448 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642789312 |
Product | protein of unknown function UPF0005 |
Protein accession | YP_002219879 |
Protein GI | 198283558 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0811132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGG ACCAGAACCC TTACCAGTTT CCGGACAGCA TGAATCCGCC CGGATCGGGC AGCGGCACAG CCATCGGCAC GCTGATGGGC AAGACCTATG CGCTGCTTGC GGCCACACTC GTCGTTTCAA CCATAGCCTC CATTTACGGC ATGCATTCGC CGTTTGCCTA TGAACATCCC TTCATCCTGA TGATCGGTTC CTTTGCCCTG CTCTTTGCGG TGCAGTACAC CGGCGCGCAT CGCAGCCCCT TTGCCGTCCC TCTGGTCTTT CTGTTTGCGG GTGGCATGGG CATGATGATG GGTCCGGCCA TCGAGATGTA TCTGCGGATG CCAGGCGGCG CCTCCATCAT CGCCGAAGCC CTGGGTACTA CCGCAGCCAT GTTTGTCGGA CTTTCCGCCT ATGCGGTCAC CACGCGACGG GATTTCAGCA ACATCGGTGG TTTCCTGATC ACCGGTCTGG TGCTGGCCAT CGTGGTCTCT CTGCTGAACA TCTTCCTGCT GCATATCCCC GCGTTGCAAC TCGCCATTGC GGGCGTCCTG GTGCTGGTCT TCAGCGGCCT GATCCTTTTT GACACCCAGC GGATGATTCG CGGCGGCATT CAGGAGCCAG TCCTGCTGGT CGTCGGTCTC TATCTGGATA TCATCAATCT CTTCATGGCG CTGCTCGAAA TCTTCGGCGG CAACCGCAAT TGA
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Protein sequence | MNQDQNPYQF PDSMNPPGSG SGTAIGTLMG KTYALLAATL VVSTIASIYG MHSPFAYEHP FILMIGSFAL LFAVQYTGAH RSPFAVPLVF LFAGGMGMMM GPAIEMYLRM PGGASIIAEA LGTTAAMFVG LSAYAVTTRR DFSNIGGFLI TGLVLAIVVS LLNIFLLHIP ALQLAIAGVL VLVFSGLILF DTQRMIRGGI QEPVLLVVGL YLDIINLFMA LLEIFGGNRN
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