Gene Lferr_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1423 
Symbol 
ID6877397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1379068 
End bp1379511 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID642789295 
Productprotein of unknown function UPF0150 
Protein accessionYP_002219862 
Protein GI198283541 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATATG TTTACCCTGT AACGCTGGTA AAGGACGAGG ATGGTGAGTT CCTCGCTACC 
TCTCGTGATG TTCCCGAAGC CATCACCAGC GGCGCCACCG AAAGCGAGGC GTTGCAAGCC
ATGAGCGATG CGCTGGGCGC GGCACTGGCA GGTTACGTGC TGGACCAGCA AGATGTTCCC
TCACCCTCCA CCCCCGCACA AGGCGAATAC CTGGTGCCAG TAGCGGCGCT GGTAGCGGCC
AAGTTGGCAT TGAGATCAGC GATGCAATCA GAAGGCGTCA ACAATACGGA ACTGGCGCGA
CGCCTTCACC TATCTGAAGG CGCCATCCGT CGTCTGGTGG ATATGGACCA CGCATCGCGC
ATGGATAGGG TTATCGCGGC GCTGGCCGTC CTGGGCGCGG GCATCATCAT CGAGGATCAG
CGGCAAACGA TGGTTGCGGC TTAA
 
Protein sequence
MRYVYPVTLV KDEDGEFLAT SRDVPEAITS GATESEALQA MSDALGAALA GYVLDQQDVP 
SPSTPAQGEY LVPVAALVAA KLALRSAMQS EGVNNTELAR RLHLSEGAIR RLVDMDHASR
MDRVIAALAV LGAGIIIEDQ RQTMVAA