Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1302 |
Symbol | |
ID | 6877276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1262943 |
End bp | 1263542 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642789178 |
Product | hypothetical protein |
Protein accession | YP_002219745 |
Protein GI | 198283424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.236926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000071931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGATT CTATTATGTG TATAGAAACC CTACACAACT GTCTGGTTCG CGTGCACATG AAACGACTGG ATCTGCTGAA TCGCCTATCC GCCCTGGAAC AGAAGGGGCT TGTCGTCTAT TCCAGACGAG ACCTGGAGAA GATTTTTCCG GAAGAGGATG AGAAAGCGCT GGAGAAGAGC TTGCAACGCA TGTGCCAGGA CAACCTTCTG GTTCGCGCCG CTCGCGGCAT CTACGTTTTT GGTCCAGCTG TGCCGCGTCA CCGGGGCTGG CTGATCGAGC GGATCGCGCA GGCCCTGCGC CCGGGAGATT TCAATTACGT TTCTCTGGAA AGTATTCTCT CGGAATATGG TGTGATCTCA CAGATTCCTG TGGATCGCTT GACGGTAATG ACCACAGGCG CGAAAGGACT CCACAAGACC CCCTTTGGGG CTATTGAATT CACGCACACC AAGCGCACTA TTCCGGATCT TCTGGAAAGA ACATTAGTCG TCAAGGGGCG TCCATTGCGT ATTGCCAGAA AGCAGGCTGC CATCCAGGAT CTCCATCGTG TAGGACGGAA CATAGACTTG ATTGATCGGG ACGAGGTGGA TGATGAATAA
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Protein sequence | MADSIMCIET LHNCLVRVHM KRLDLLNRLS ALEQKGLVVY SRRDLEKIFP EEDEKALEKS LQRMCQDNLL VRAARGIYVF GPAVPRHRGW LIERIAQALR PGDFNYVSLE SILSEYGVIS QIPVDRLTVM TTGAKGLHKT PFGAIEFTHT KRTIPDLLER TLVVKGRPLR IARKQAAIQD LHRVGRNIDL IDRDEVDDE
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