Gene Lferr_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1293 
Symbol 
ID6877267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1259003 
End bp1259326 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content51% 
IMG OID642789171 
Producthistone family protein DNA-binding protein 
Protein accessionYP_002219738 
Protein GI198283417 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000164009 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000192229 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTATTA CCAAGAAAGA TCTGGCAAAT CATTTGTGGG AAGTGGGCGG TTGGACCCAT 
CCGCAAGCCG AGCAATTTGT GGATGCCTTC TTTGAACACA TGCGTGCCGC TATCATCACA
GAGTCGGAAC TCAAGTTATC GGGATTCGGT AGATTTACCG TGCGGGCTAA ATCGTCGCGC
CCTGGCCGCA ATCCCAAAAC CGGACAACCA TACGAAATCA AAGCCCGTCG AGTGGTGACA
TTCAGCGCAA GTGCTCTGTT GCGCGCGAAA TCTAATCAGA TTTTTCCGTA TTCTCGGCGT
CTACGCCATA AAACCCCTCA GTAG
 
Protein sequence
MTITKKDLAN HLWEVGGWTH PQAEQFVDAF FEHMRAAIIT ESELKLSGFG RFTVRAKSSR 
PGRNPKTGQP YEIKARRVVT FSASALLRAK SNQIFPYSRR LRHKTPQ