| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1286 |
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| Symbol | |
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| ID | 6877260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1253051 |
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| End bp | 1253710 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642789164 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002219731 |
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| Protein GI | 198283410 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000902529 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCGAGC AACGCACGCT GGCCCTGATC GACGACCTGC TTCAGCGTCC GGCAGAGACC
TCGTGGGTGG AGTTCAAAAA GAACAATGCT GATGCGCAGA TGATCGGCAA GTTGATCTCG
GCTCTGTCCA ATGCGGCGCG GCTCGCTGAT CAGCCGTTTG CCTATGTGTT GTGGTGCGTG
CGTGATGGCG ATCACGCGGC CATCAGCACC ACATTCGAGC CTTCCGGTCA GTTGCAGCAA
GGCCAGCCGC TGGATATGTG GTTGGCGCAG CGCCTGCAAC CGGCCATTGC TTTCAACTTC
AAGCTTGTCG ATTACCACGG CATACGGCTG GGCATGCTGG AGATTCCGGC AGCCGCCGGC
AGCCCGGTGG AATTTGAGCG GCAGGCTTTT ATCCGCATCG GCAGTGCCAC CCCCCGGCTT
TCGGATCACC CGGAACGCTT GAAAGCCCTG TGGGCGAAAT TGCAGCCCTA TGCCTGGGAA
ACGGGCATCG CGGCGCAATT TCTGAGCGGC GATGAGGTGC TGGCGCGGCT GGATTACGCC
ACCTACTTTG ACCTGACTGG CCAACCGTTG CCGGACAACC GCAAGGGCAT TTTCGACAAG
CTTACAGCCG ACATCTGGTG CAGGGTGATG TGGGCGGGCT ATGTCCCGTT CTGGGCATAG
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| Protein sequence | MSEQRTLALI DDLLQRPAET SWVEFKKNNA DAQMIGKLIS ALSNAARLAD QPFAYVLWCV
RDGDHAAIST TFEPSGQLQQ GQPLDMWLAQ RLQPAIAFNF KLVDYHGIRL GMLEIPAAAG
SPVEFERQAF IRIGSATPRL SDHPERLKAL WAKLQPYAWE TGIAAQFLSG DEVLARLDYA
TYFDLTGQPL PDNRKGIFDK LTADIWCRVM WAGYVPFWA
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