Gene Lferr_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1277 
Symbol 
ID6877251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1238124 
End bp1238978 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content62% 
IMG OID642789155 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_002219722 
Protein GI198283401 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0461295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AGTCCGATAT CAACCATCAG CCATCAGTCC ATGCGGGCGA TGCTGCCAGG 
GATCTCCTTG CCCGATGGGG ATTCGACCCT ACCAATGAGG CGATCCTGCC CGACCGTCAT
CCCCAGTACC GCGAGTGCGC GCGCCACGGC CGCTATCCGA TCTCCATGGT GGATGAGCGG
GACGTCATCC GCTACCTGTC ACCGGTCTGT CCGGTGTGCG CGGCGGAGCA TGCCTCCCGT
CGGCTCATGG AGAGCGCGGC CATCCCAAAG CGTTACATTG ACTGCGGCTT CGACAACTAC
GTGGTCGAGG TCCACGGTCA GCAGGCGGCT ATCGACGTCT GCCGGGACTA CGCAGATCAT
TTCGAAGAGC ACGCCCAAAA GGGATCCTGT CTCATCCTCT GCGGGAATCC CGGCACCGGC
AAGAACCACC TGGCGTCTGC CATCGCCCAC GTGGTGCTGG CCAAAGGGCA CAGCGTGCTC
CAGGTCACCG CCTACGACAT CATTGCCCGG ATCCGCCAGA CCTGGCAGCG GGGAATCGGC
AACAGCACGG AGCTGGAGGT CATCCGCGGG TTTGCGGAAG TGGGCCTGCT CATCATCGAC
GAGGTTGGGA AAACCTTCGG CAGCGATGGA GAGCGGGTGC ATCTCTTCGA GGTGATCGAT
CACCGATATC GCGATCTAAA GCCGACCCTC ATCCTGTCCA ACGAGAATAT GGAGGGCGTG
GAGAAATGCC TGGGTCCGGC CGCCTTCGAC CGGCTGTGTC AAAATGGCGG CCTGCTGCTC
TTTGACTGGC AGAGCCATCG CCGGGGGAGG GGGTGCACAT CCGACACGGC TCTCTGTCTG
CGGGGTGAAT CATGA
 
Protein sequence
MEKKSDINHQ PSVHAGDAAR DLLARWGFDP TNEAILPDRH PQYRECARHG RYPISMVDER 
DVIRYLSPVC PVCAAEHASR RLMESAAIPK RYIDCGFDNY VVEVHGQQAA IDVCRDYADH
FEEHAQKGSC LILCGNPGTG KNHLASAIAH VVLAKGHSVL QVTAYDIIAR IRQTWQRGIG
NSTELEVIRG FAEVGLLIID EVGKTFGSDG ERVHLFEVID HRYRDLKPTL ILSNENMEGV
EKCLGPAAFD RLCQNGGLLL FDWQSHRRGR GCTSDTALCL RGES